Detailed information of component protein


Summary

Component ID T6CP210269
Component protein type TssM
T6SS ID (Type) T6SS14097 experimental (Type i3)
Strain Enterobacter cloacae strain DSM 30054
Replicon chromosome
Sequence Protein sequence (1207 a.a.); Nucleotide sequence (3621 bp)
Reference
experimental Experimental investigation has been performed on this T6SS
External database links

Locus tag (Gene) HWQ16_RS19715
Coordinate (Strand) 4040566..4044186 (+)
NCBI ID WP_013096178.1
RefSeq NZ_CP056776
Uniprot ID A0A0H3CHH1_ENTCC
KEGG ID enc:ECL_01536
PDB ID -
Pfam domain hit(s)

Domain Pfam ID E-value Aligned region
IcmF-related_N PF14331.8 1e-92 211..480
IcmF-related PF06761.14 3.3e-86 532..834
IcmF_C PF06744.14 2.4e-21 1089..1192
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Inside 1-12 MLTTLLSILTNR
Transmembrane helix 13-34 ILWSFLGVTALSAVIWMIGPLL
Outside 35-48 SIVDTRPLESEQNR
Transmembrane helix 49-71 IISIAVVYLLWAQGHILPRLYNA
Inside 72-471 WLNRKLMDKLNENTAKPDAADPQKRLNSEEQILAGRFDEAAQMLKKAHFSKAGHGAQWTQRFSTQYLYQLPWYVIIGAPGAGKTTALVNSGLQFPLADRFGKTALRGIGGTRNCDWWFTNEAVLLDTAGRYTTQESEQVQDAGEWLEFIGLLRKYRRRQPINGVIITISISDLLTLSPEAARQQAVNLRQRLSELHEQLGIRFPVYVMVTKADLLKGFRAWFADYDKAQRDQIWGFTLPWEQTKHADFDLMGNFHQEFSLLQQRLDAGLPETMLKEHDAKTRAEAYLFPQEFAALRPLLADYLSTVFARSNFETEFSPRGIYFASGTQEGMPFDRVMGELNRALSLPEGAEAEKWDSVSKEAPIPGAKGQSFFIKNLLQNVIFQEAGIAGENRWWELRNR
Transmembrane helix 472-494 AVIWSGYAALLALLVILGGLWLT
Outside 495-1206 SYAKNKAYLEEVDAKVPQLEQQSKALQNQPQRDLFALLPLLNSLVDLPKSEAFDVNDPPVSRRMGLYRGDDVSDASQSLYQKALDQMLLPAVAMHITTWLRNDNGSDVEYSYEALKAYQMLYQPKHYDGKFLHSWVMLNLQRNLPQNVTQAQLQQLEWHLTQLLEPKIQASPYAQDEALVARERALINQQPLSTRVYGRLKRLLEHDENLKPVSLSDLGGPQSELVFSRKSGKPVSEGVPGLYTPDGYWKSFNSQIDSVTTALHEDDAWVLGATTSGEDKQQIDNAVRQLYMRDFIANWDRFLADIQLNNSADLSQRINTARLLSGANSPLRRLVQNLSQVLTLSRNAPAPEDAGKAQDQSNRATRTLEALFRNNDNAPTQGAVVTQAPEQLVTDHYAPMIELAQPLEKGGKTIVFDDFLKQVDELYRYLTAVQDAANSGMPAPGGEAISRLQASAGRLPGGLQTMFSNMAVGASSDTQRRDLENVRKRINVEVGGFCRQAIAGRYPLVRSASTEVTPDDLARMFAPGTGLMDTFFRDNLTNKVDTTQANWRFMPGIDGKTLPGSEGLLRPFQQAQSIRDAFFANGATTPSFKVTVRTVRMDNTILNLTLDVDGQLLRYSHGPQAVQIMNWPGPGGTNQVRMQLGLANGSTATLVTNGAWALNRFFDKARTSPGAGSLSRQATFNVDGHQVTLEFAPNSIRNPFQLPRFSCP


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
Other 0.9925 - -


  Protein sequence: 1207 a.a.    

>T6CP210269 NZ_CP056776:4040566-4044186 [Enterobacter cloacae] [TssM]
MLTTLLSILTNRILWSFLGVTALSAVIWMIGPLLSIVDTRPLESEQNRIISIAVVYLLWAQGHILPRLYNAWLNRKLMDK
LNENTAKPDAADPQKRLNSEEQILAGRFDEAAQMLKKAHFSKAGHGAQWTQRFSTQYLYQLPWYVIIGAPGAGKTTALVN
SGLQFPLADRFGKTALRGIGGTRNCDWWFTNEAVLLDTAGRYTTQESEQVQDAGEWLEFIGLLRKYRRRQPINGVIITIS
ISDLLTLSPEAARQQAVNLRQRLSELHEQLGIRFPVYVMVTKADLLKGFRAWFADYDKAQRDQIWGFTLPWEQTKHADFD
LMGNFHQEFSLLQQRLDAGLPETMLKEHDAKTRAEAYLFPQEFAALRPLLADYLSTVFARSNFETEFSPRGIYFASGTQE
GMPFDRVMGELNRALSLPEGAEAEKWDSVSKEAPIPGAKGQSFFIKNLLQNVIFQEAGIAGENRWWELRNRAVIWSGYAA
LLALLVILGGLWLTSYAKNKAYLEEVDAKVPQLEQQSKALQNQPQRDLFALLPLLNSLVDLPKSEAFDVNDPPVSRRMGL
YRGDDVSDASQSLYQKALDQMLLPAVAMHITTWLRNDNGSDVEYSYEALKAYQMLYQPKHYDGKFLHSWVMLNLQRNLPQ
NVTQAQLQQLEWHLTQLLEPKIQASPYAQDEALVARERALINQQPLSTRVYGRLKRLLEHDENLKPVSLSDLGGPQSELV
FSRKSGKPVSEGVPGLYTPDGYWKSFNSQIDSVTTALHEDDAWVLGATTSGEDKQQIDNAVRQLYMRDFIANWDRFLADI
QLNNSADLSQRINTARLLSGANSPLRRLVQNLSQVLTLSRNAPAPEDAGKAQDQSNRATRTLEALFRNNDNAPTQGAVVT
QAPEQLVTDHYAPMIELAQPLEKGGKTIVFDDFLKQVDELYRYLTAVQDAANSGMPAPGGEAISRLQASAGRLPGGLQTM
FSNMAVGASSDTQRRDLENVRKRINVEVGGFCRQAIAGRYPLVRSASTEVTPDDLARMFAPGTGLMDTFFRDNLTNKVDT
TQANWRFMPGIDGKTLPGSEGLLRPFQQAQSIRDAFFANGATTPSFKVTVRTVRMDNTILNLTLDVDGQLLRYSHGPQAV
QIMNWPGPGGTNQVRMQLGLANGSTATLVTNGAWALNRFFDKARTSPGAGSLSRQATFNVDGHQVTLEFAPNSIRNPFQL
PRFSCP*

  Nucleotide sequence: 3621 bp    

>T6CP210269 NZ_CP056776:4040566-4044186 [Enterobacter cloacae] [TssM]
ATGCTGACGACTCTTCTTTCCATACTGACCAATCGCATTCTGTGGAGCTTCCTGGGCGTTACCGCGCTGTCGGCGGTGAT
CTGGATGATTGGTCCGCTGTTATCCATCGTGGATACCCGCCCGCTCGAATCTGAACAAAACCGCATCATCAGTATTGCGG
TGGTTTATCTGCTCTGGGCGCAGGGGCATATTCTGCCGCGGCTCTACAACGCCTGGCTGAACCGCAAGCTGATGGACAAG
CTCAATGAAAACACCGCCAAACCGGACGCGGCCGATCCCCAGAAGCGGCTGAACAGCGAGGAGCAGATCCTCGCCGGACG
TTTTGATGAAGCGGCGCAAATGCTGAAGAAAGCCCACTTCAGCAAAGCGGGACACGGTGCCCAGTGGACGCAGCGCTTCA
GTACGCAATATCTCTACCAGCTGCCGTGGTACGTCATTATCGGCGCACCGGGCGCCGGTAAAACCACGGCGCTGGTCAAT
TCCGGCCTGCAATTCCCGCTGGCGGATCGCTTCGGTAAAACCGCTCTGCGCGGCATTGGCGGCACCCGCAACTGCGACTG
GTGGTTCACTAATGAAGCCGTCCTGCTGGACACCGCGGGGCGCTACACCACTCAGGAGAGCGAGCAGGTTCAGGATGCCG
GGGAGTGGCTGGAATTTATCGGCCTGCTGCGTAAGTATCGCCGCCGCCAGCCTATTAACGGCGTCATTATCACCATCAGC
ATTTCCGATCTGCTGACGCTCTCCCCGGAAGCGGCGCGCCAGCAGGCGGTTAACCTGCGCCAGCGGCTGTCTGAGCTGCA
TGAACAGCTGGGTATCCGCTTCCCGGTTTACGTGATGGTGACCAAGGCGGACCTGCTTAAAGGCTTCCGCGCCTGGTTTG
CTGACTACGACAAAGCGCAGCGCGACCAGATTTGGGGCTTCACGCTGCCGTGGGAACAGACCAAACACGCCGATTTCGAC
TTGATGGGGAACTTCCACCAGGAGTTCTCGCTGTTGCAGCAGCGTCTGGACGCCGGGCTGCCGGAGACCATGCTGAAAGA
GCATGACGCCAAAACCCGTGCCGAAGCGTATCTCTTCCCGCAGGAGTTCGCGGCGCTGCGCCCGCTGCTGGCAGACTACC
TGAGCACGGTCTTTGCCCGCTCTAACTTTGAGACCGAGTTCTCCCCACGCGGAATATACTTCGCCAGCGGCACCCAGGAA
GGCATGCCGTTCGACCGCGTCATGGGTGAACTGAACCGCGCCCTGTCACTGCCGGAAGGGGCAGAGGCAGAGAAGTGGGA
TTCGGTCAGTAAAGAGGCGCCGATCCCCGGTGCAAAAGGGCAGAGCTTCTTCATTAAAAACCTGCTGCAAAACGTCATTT
TCCAGGAAGCCGGTATTGCCGGTGAAAACCGCTGGTGGGAACTGCGCAACCGCGCGGTGATCTGGTCCGGATACGCGGCG
CTGCTGGCGCTGCTGGTGATCCTTGGCGGACTGTGGCTGACCAGCTATGCCAAAAATAAGGCCTATCTGGAAGAGGTGGA
CGCTAAAGTCCCGCAGCTGGAGCAGCAGAGTAAAGCGTTACAGAATCAGCCCCAGCGCGATCTGTTCGCGCTCCTGCCGC
TGCTGAACAGCCTGGTCGATCTGCCGAAAAGCGAGGCATTCGATGTCAACGACCCGCCGGTCTCCCGCCGTATGGGGCTC
TATCGCGGGGATGACGTCAGCGATGCTTCCCAGTCGCTGTATCAGAAAGCGCTGGATCAGATGCTGCTGCCCGCCGTGGC
GATGCATATCACCACCTGGCTGCGCAACGACAACGGCAGCGACGTGGAATACAGCTACGAGGCGCTGAAAGCCTACCAGA
TGCTGTATCAGCCTAAACACTACGACGGCAAATTCCTGCATTCCTGGGTGATGCTCAATTTACAGCGTAATCTGCCGCAG
AACGTGACGCAGGCGCAGCTGCAACAGCTGGAGTGGCACCTGACGCAGCTGCTGGAGCCAAAAATTCAGGCTTCGCCGTA
TGCCCAGGACGAAGCGCTGGTGGCTCGCGAGAGGGCGCTCATCAACCAGCAGCCGCTCTCCACCCGCGTGTATGGGCGTC
TGAAGCGTCTGCTGGAGCATGACGAAAACCTGAAGCCGGTCTCCCTGTCCGACCTGGGTGGCCCGCAGAGCGAACTGGTG
TTCTCCCGCAAAAGCGGCAAACCGGTGAGCGAAGGCGTGCCGGGGCTCTACACCCCGGACGGCTACTGGAAGAGCTTTAA
CAGCCAGATTGACAGCGTGACCACGGCGCTGCACGAAGATGATGCCTGGGTGCTGGGCGCGACCACCTCCGGGGAAGACA
AGCAGCAGATCGATAACGCCGTGCGTCAGCTCTACATGCGCGACTTTATCGCAAACTGGGATCGTTTCCTCGCCGACATT
CAGCTTAACAACAGCGCCGATCTCTCGCAGCGCATCAACACGGCGCGCCTGCTCTCCGGCGCAAACTCGCCGCTGCGCCG
TCTGGTGCAGAACCTGAGCCAGGTGCTGACGCTGTCGCGCAACGCGCCAGCGCCGGAGGACGCGGGGAAAGCGCAAGACC
AGAGTAACCGCGCCACCCGTACCCTCGAAGCGCTGTTCCGCAATAACGACAATGCTCCGACGCAGGGGGCAGTAGTGACG
CAGGCACCTGAACAGCTGGTGACCGACCATTACGCGCCAATGATCGAGCTGGCTCAGCCGCTGGAGAAGGGCGGCAAGAC
CATCGTCTTTGATGATTTCCTCAAGCAGGTGGATGAGCTGTATCGTTATCTGACCGCGGTGCAGGACGCTGCCAACAGCG
GCATGCCAGCCCCGGGTGGTGAAGCAATCAGCCGTCTGCAGGCCAGCGCCGGGCGTCTGCCGGGCGGGCTGCAAACCATG
TTCAGCAACATGGCGGTGGGGGCCAGCAGTGATACCCAGCGTCGCGATCTGGAAAACGTCCGTAAGCGCATTAACGTCGA
AGTGGGTGGTTTCTGCCGTCAGGCAATTGCCGGTCGCTACCCGCTGGTGCGCAGCGCCAGCACCGAGGTGACGCCGGACG
ATCTGGCACGCATGTTTGCGCCGGGTACCGGGCTGATGGATACCTTCTTTCGCGACAACCTGACCAACAAAGTGGATACC
ACTCAGGCGAACTGGCGCTTTATGCCGGGGATCGACGGTAAAACGCTGCCGGGAAGTGAAGGACTGCTGCGACCGTTCCA
GCAGGCCCAGTCCATTCGCGATGCCTTCTTTGCTAACGGTGCGACGACCCCCTCTTTCAAGGTGACGGTGCGTACCGTGC
GGATGGATAACACCATTCTTAACCTGACGCTGGACGTTGACGGCCAACTGCTGCGTTACAGCCACGGTCCACAGGCGGTG
CAGATCATGAACTGGCCAGGGCCGGGCGGCACCAACCAGGTGCGTATGCAGCTGGGTCTGGCCAACGGCAGCACCGCGAC
GCTGGTAACCAACGGCGCCTGGGCCCTGAACCGCTTCTTCGATAAAGCGCGCACCAGCCCTGGGGCAGGTAGTCTGAGCC
GTCAGGCCACGTTCAACGTCGATGGCCATCAGGTCACGCTGGAGTTTGCGCCGAACAGCATTCGCAATCCGTTCCAGCTT
CCTCGTTTCTCATGCCCATAA