Detailed information of component protein


Summary

Component ID T6CP210267
Component protein type TssK
T6SS ID (Type) T6SS14097 experimental (Type i3)
Strain Enterobacter cloacae strain DSM 30054
Replicon chromosome
Sequence Protein sequence (448 a.a.); Nucleotide sequence (1344 bp)
Reference
experimental Experimental investigation has been performed on this T6SS
External database links

Locus tag (Gene) HWQ16_RS19705
Coordinate (Strand) 4037964..4039307 (+)
NCBI ID WP_013096176.1
RefSeq NZ_CP056776
Uniprot ID A0A5E1ABM6_9ENTR, A0A0M7ELH6_ENTCL, A0A331GJE7_KLEPN, A0A0H3CKL6_ENTCC
KEGG ID eclg:EC036_26090, enc:ECL_01534
PDB ID -
Pfam domain hit(s)

Domain Pfam ID E-value Aligned region
T6SS_VasE PF05936.14 1.3e-136 19..442
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Outside 1-447 MTKAEKVVWTEGMFLRPHHFQRTESYLLNHVREWGALQRSYLWGFLDVELDEAMLRQGCIALSYASGVLPDGTFFQVRNGRNGPAPLKIPDNLTNEKVVLALPVRRGEREEVIFSEEPASLARFIAFEQEVEDDNAMSVGDATVQFGRLRLTLMLEKDLTAEWTAIGIAFVAEKRNDNHVRLDSSYIPPMLNACNSPQLYSMVNDLHGLLVQRSQQIGGRLRQPGRFNTSELIEFTLLSLVNRHLGEVSHLKTLPLLHPETLWRSWLPFATELATWTSQRTAESVLPIYDHDDLAGCFSKLMLMLRQGLSLVMEDQAIQLPLNERSHGLNIATVPETSMVREFGFVLAVKANVPGEHLQTHFPAQMKVAPVSKIRDLVQLQLPGIMLRAMPVAPPQIPWHAGYSYFELEKGSELWHEMDKSGAFALHLAGEFPGLDMEFWAIRSPTE


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
Other 0.9976 - -


  Protein sequence: 448 a.a.    

>T6CP210267 NZ_CP056776:4037964-4039307 [Enterobacter cloacae] [TssK]
MTKAEKVVWTEGMFLRPHHFQRTESYLLNHVREWGALQRSYLWGFLDVELDEAMLRQGCIALSYASGVLPDGTFFQVRNG
RNGPAPLKIPDNLTNEKVVLALPVRRGEREEVIFSEEPASLARFIAFEQEVEDDNAMSVGDATVQFGRLRLTLMLEKDLT
AEWTAIGIAFVAEKRNDNHVRLDSSYIPPMLNACNSPQLYSMVNDLHGLLVQRSQQIGGRLRQPGRFNTSELIEFTLLSL
VNRHLGEVSHLKTLPLLHPETLWRSWLPFATELATWTSQRTAESVLPIYDHDDLAGCFSKLMLMLRQGLSLVMEDQAIQL
PLNERSHGLNIATVPETSMVREFGFVLAVKANVPGEHLQTHFPAQMKVAPVSKIRDLVQLQLPGIMLRAMPVAPPQIPWH
AGYSYFELEKGSELWHEMDKSGAFALHLAGEFPGLDMEFWAIRSPTE*

  Nucleotide sequence: 1344 bp    

>T6CP210267 NZ_CP056776:4037964-4039307 [Enterobacter cloacae] [TssK]
ATGACCAAAGCAGAGAAGGTCGTCTGGACCGAAGGCATGTTCCTGCGTCCACACCATTTTCAACGGACAGAAAGTTATCT
GCTCAACCACGTTCGGGAATGGGGTGCGCTGCAGCGATCGTATCTTTGGGGCTTCCTCGATGTTGAACTGGACGAAGCGA
TGCTTCGCCAGGGCTGCATTGCCCTGAGCTATGCCAGCGGTGTGCTACCCGACGGTACGTTTTTCCAGGTTCGCAATGGG
CGCAATGGCCCAGCCCCGCTGAAAATTCCCGACAATCTCACCAACGAAAAGGTGGTGCTCGCGCTGCCGGTACGTAGGGG
AGAGCGTGAAGAGGTTATTTTCAGCGAAGAGCCCGCGTCACTGGCGCGTTTCATCGCCTTCGAGCAGGAAGTGGAAGACG
ATAACGCCATGTCGGTGGGGGATGCCACGGTGCAGTTTGGCCGTTTACGTCTGACCCTGATGCTGGAAAAAGATCTGACG
GCCGAATGGACGGCGATTGGCATCGCGTTTGTCGCGGAAAAGCGCAACGACAACCATGTGCGTCTGGATAGCAGCTACAT
TCCGCCGATGCTGAACGCCTGCAACAGCCCGCAACTTTACAGCATGGTCAACGATCTCCACGGCTTGCTGGTGCAGCGCA
GCCAGCAGATTGGGGGGCGTTTGCGCCAGCCTGGCCGCTTTAACACCTCTGAGCTGATCGAATTTACGCTGCTGTCGCTG
GTTAACCGTCACCTGGGCGAAGTCTCCCATTTAAAAACGCTCCCGCTACTGCACCCGGAAACGCTCTGGCGCAGCTGGCT
GCCGTTTGCCACGGAGCTTGCCACCTGGACCTCGCAACGCACCGCCGAAAGCGTGCTGCCGATTTACGATCACGACGACC
TTGCGGGATGCTTCAGCAAGCTGATGCTGATGCTGCGTCAGGGGTTGTCGCTGGTGATGGAAGATCAGGCCATTCAGCTG
CCGCTGAACGAGCGCTCTCATGGCCTGAACATCGCCACGGTGCCGGAAACCAGCATGGTGCGCGAGTTCGGCTTCGTCCT
GGCGGTCAAAGCCAACGTGCCGGGCGAACACCTGCAAACCCATTTCCCTGCCCAGATGAAAGTCGCGCCGGTGTCGAAAA
TCCGCGATCTGGTTCAGTTACAGCTGCCGGGCATCATGCTGCGCGCCATGCCGGTTGCGCCGCCGCAAATCCCATGGCAT
GCGGGCTACAGCTACTTTGAGCTGGAGAAGGGCAGCGAGCTGTGGCACGAGATGGATAAGTCCGGTGCATTCGCCCTGCA
TCTCGCAGGGGAGTTCCCGGGTCTTGATATGGAGTTTTGGGCCATCCGTAGCCCGACTGAATAA