Detailed information of component protein
Summary
Component ID | T6CP207880 |
Component protein type | TssH |
T6SS ID (Type) | T6SS13923 (Type i3) |
Strain | Enterobacter sp. DSM 30060 |
Replicon | chromosome |
Sequence | Protein sequence (872 a.a.); Nucleotide sequence (2616 bp) |
Reference |
External database links
Locus tag (Gene) | HWQ15_RS21325 |
Coordinate (Strand) | 4471994..4474609 (-) |
NCBI ID | WP_063138102.1 |
RefSeq | NZ_CP056118 |
Uniprot ID | A0A145EHX2_9ENTR |
KEGG ID | - |
PDB ID | - |
Pfam domain hit(s)
Domain | Pfam ID | E-value | Aligned region |
---|---|---|---|
AAA_2 | PF07724.16 | 2.2e-39 | 602..767 |
AAA_lid_9 | PF17871.3 | 2e-25 | 363..454 |
ClpB_D2-small | PF10431.11 | 5.9e-14 | 775..847 |
AAA | PF00004.31 | 4.1e-10 | 223..355 |
Transmembrane helices
- Transmembrane helices are predicted using TMHMM 2.0 software.
Prediction | Region | Sequence |
---|---|---|
Outside | 1-871 | MSEISRAVLFGKLDTLLFTSLESATAFCKLRGNPYVELVHWLHQLMQQQDGDLQQVIRHFALDEQQLTRDIVAALDALPRGASSVSDLSEHIDSAVERAWVYGSLKFGVSRIRGGHLLIGILKTWNLANVLKSISAQFTRLNVEVLIEQFDAICASSKESQQAAAAADAAAGAVPAAQGTLAQYGQDLTARARDGKIDPVVGRDEEIRQMVDILMRRRQNNPLLTGEAGVGKTAVVEGLALRIADGDVPEPLQNVQLWLLDIGMLQAGAGMKGEFEARLQALINEVQSSATPIILFIDEIHTLIGAGGQQGTGDAANLLKPALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQVHEPDEAKAVLMLRSTVSPLETHHQVLLLDEAVSAAVKLSHRYIPARQLPDKAVALLDTACARVAVSQSAPPAQLEDCLRHLAALDVELEIAEREARVGAGDPARVATLSAERDAFETQREALARRWEEERTRVQEIIRLRAALFAASDEDTAELRGQLTEQQQALKTLQGDEPLLFAAVDENVVAAVVSDWTGIPLGRMVKNEIDAVLNLADTLNQRVIGQRHGLDLIARRVKTSRAKLDDPNKPVGVFMLCGPSGVGKTETALALAESLYGGEQNVITINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHEIFFQVFDKGWMEDGEGRHIDFRNTIIILTSNVGTELIAAMCADPELMPDPDALSGALRQPLLEVFPPALLGRLLVVPYYPLSDEMLGQIVRLQLRRIQRRLEENHNIISEFDDSVVEQIVQRCTEVESGGRMVDAILTNTLLPQMSQILLTASRSDEQYRRLHVTCEQGEFHCQFAA |
Signal peptides
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction | Probability | Cleavage site | Signal peptide sequence |
---|---|---|---|
Other | 0.9627 | - | - |
Protein sequence: 872 a.a.
>T6CP207880 NZ_CP056118:c4474609-4471994 [Enterobacter sp. DSM 30060] [TssH]
MSEISRAVLFGKLDTLLFTSLESATAFCKLRGNPYVELVHWLHQLMQQQDGDLQQVIRHFALDEQQLTRDIVAALDALPR
GASSVSDLSEHIDSAVERAWVYGSLKFGVSRIRGGHLLIGILKTWNLANVLKSISAQFTRLNVEVLIEQFDAICASSKES
QQAAAAADAAAGAVPAAQGTLAQYGQDLTARARDGKIDPVVGRDEEIRQMVDILMRRRQNNPLLTGEAGVGKTAVVEGLA
LRIADGDVPEPLQNVQLWLLDIGMLQAGAGMKGEFEARLQALINEVQSSATPIILFIDEIHTLIGAGGQQGTGDAANLLK
PALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQVHEPDEAKAVLMLRSTVSPLETHHQVLLLDEAVSAAVKLSHRY
IPARQLPDKAVALLDTACARVAVSQSAPPAQLEDCLRHLAALDVELEIAEREARVGAGDPARVATLSAERDAFETQREAL
ARRWEEERTRVQEIIRLRAALFAASDEDTAELRGQLTEQQQALKTLQGDEPLLFAAVDENVVAAVVSDWTGIPLGRMVKN
EIDAVLNLADTLNQRVIGQRHGLDLIARRVKTSRAKLDDPNKPVGVFMLCGPSGVGKTETALALAESLYGGEQNVITINM
SEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHEIFFQVFDKGWMEDGEGRHIDFRNTII
ILTSNVGTELIAAMCADPELMPDPDALSGALRQPLLEVFPPALLGRLLVVPYYPLSDEMLGQIVRLQLRRIQRRLEENHN
IISEFDDSVVEQIVQRCTEVESGGRMVDAILTNTLLPQMSQILLTASRSDEQYRRLHVTCEQGEFHCQFAA*
MSEISRAVLFGKLDTLLFTSLESATAFCKLRGNPYVELVHWLHQLMQQQDGDLQQVIRHFALDEQQLTRDIVAALDALPR
GASSVSDLSEHIDSAVERAWVYGSLKFGVSRIRGGHLLIGILKTWNLANVLKSISAQFTRLNVEVLIEQFDAICASSKES
QQAAAAADAAAGAVPAAQGTLAQYGQDLTARARDGKIDPVVGRDEEIRQMVDILMRRRQNNPLLTGEAGVGKTAVVEGLA
LRIADGDVPEPLQNVQLWLLDIGMLQAGAGMKGEFEARLQALINEVQSSATPIILFIDEIHTLIGAGGQQGTGDAANLLK
PALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQVHEPDEAKAVLMLRSTVSPLETHHQVLLLDEAVSAAVKLSHRY
IPARQLPDKAVALLDTACARVAVSQSAPPAQLEDCLRHLAALDVELEIAEREARVGAGDPARVATLSAERDAFETQREAL
ARRWEEERTRVQEIIRLRAALFAASDEDTAELRGQLTEQQQALKTLQGDEPLLFAAVDENVVAAVVSDWTGIPLGRMVKN
EIDAVLNLADTLNQRVIGQRHGLDLIARRVKTSRAKLDDPNKPVGVFMLCGPSGVGKTETALALAESLYGGEQNVITINM
SEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHEIFFQVFDKGWMEDGEGRHIDFRNTII
ILTSNVGTELIAAMCADPELMPDPDALSGALRQPLLEVFPPALLGRLLVVPYYPLSDEMLGQIVRLQLRRIQRRLEENHN
IISEFDDSVVEQIVQRCTEVESGGRMVDAILTNTLLPQMSQILLTASRSDEQYRRLHVTCEQGEFHCQFAA*
Nucleotide sequence: 2616 bp
>T6CP207880 NZ_CP056118:c4474609-4471994 [Enterobacter sp. DSM 30060] [TssH]
ATGTCAGAAATTAGCCGTGCCGTGCTTTTCGGCAAACTGGATACGCTGTTATTTACCTCTCTGGAAAGCGCGACTGCCTT
CTGTAAGCTGCGCGGCAACCCGTACGTTGAGCTGGTGCACTGGCTGCATCAGCTGATGCAGCAGCAGGATGGCGATCTGC
AACAGGTCATCCGTCACTTCGCCCTTGATGAACAGCAGCTGACGCGCGATATCGTGGCGGCGCTGGATGCCCTGCCGCGT
GGCGCGAGTTCCGTCTCTGACCTTTCCGAGCATATCGACAGCGCCGTCGAGCGCGCCTGGGTCTACGGCTCGCTGAAGTT
TGGCGTCAGCCGCATCCGCGGCGGCCATTTGTTGATCGGCATACTGAAAACGTGGAATCTGGCTAACGTGCTGAAAAGTA
TTTCGGCGCAGTTCACCCGTCTTAACGTCGAGGTGCTGATCGAACAGTTCGACGCTATTTGCGCCAGCAGCAAAGAGAGC
CAGCAGGCCGCCGCCGCTGCGGACGCAGCTGCCGGGGCAGTACCGGCTGCGCAGGGCACGCTGGCGCAGTATGGTCAGGA
TCTGACGGCGCGCGCCCGGGATGGGAAAATTGACCCGGTGGTGGGGCGCGATGAAGAGATCCGCCAGATGGTCGATATTC
TGATGCGTCGTCGCCAGAACAACCCCCTGCTGACCGGGGAAGCTGGCGTCGGGAAAACGGCAGTGGTGGAAGGGCTGGCG
CTGCGTATCGCTGACGGCGACGTGCCTGAGCCGCTGCAAAACGTTCAGCTGTGGCTGCTGGATATCGGCATGCTTCAGGC
CGGAGCGGGCATGAAAGGGGAATTTGAGGCGCGCCTCCAGGCGCTGATTAACGAGGTGCAGTCCAGCGCCACGCCGATTA
TTCTGTTTATCGATGAGATCCACACCCTGATTGGCGCTGGCGGCCAGCAGGGTACCGGCGATGCCGCTAACCTGCTCAAG
CCTGCCCTGGCGCGTGGGCAACTGCGCACCATCGGCGCGACCACCTGGGCGGAATACAAAAAATACATTGAGAAAGATCC
GGCGCTGACCCGCCGTTTCCAGACCGTACAGGTTCACGAGCCGGATGAAGCGAAAGCTGTATTGATGCTGCGCAGCACCG
TGTCGCCGCTGGAAACTCATCATCAGGTTTTACTCCTCGACGAAGCGGTCAGCGCGGCGGTGAAACTGTCGCATCGCTAT
ATTCCTGCGCGTCAGCTGCCGGATAAAGCGGTGGCGCTGCTGGATACCGCCTGCGCGCGCGTGGCCGTCAGCCAGAGCGC
GCCGCCTGCCCAGCTGGAAGACTGCCTGCGTCATCTGGCGGCCCTGGACGTGGAGCTGGAGATTGCCGAACGTGAAGCGC
GCGTGGGGGCGGGCGATCCGGCGCGCGTGGCGACATTAAGCGCCGAACGTGACGCGTTCGAAACCCAACGCGAGGCCCTG
GCTCGTCGCTGGGAAGAAGAGCGCACGCGGGTGCAGGAAATTATCCGTCTGCGTGCCGCACTGTTTGCGGCGAGTGATGA
GGATACGGCTGAACTGCGCGGCCAGCTGACAGAACAGCAGCAGGCGCTGAAGACCTTACAGGGTGACGAACCGCTGCTGT
TTGCGGCGGTCGATGAAAACGTGGTGGCTGCGGTGGTCTCAGACTGGACCGGGATCCCGCTGGGCCGGATGGTGAAAAAT
GAGATCGACGCGGTGCTGAACCTGGCTGATACGCTGAACCAGCGGGTTATTGGTCAGCGTCACGGTCTGGATCTGATTGC
CCGTCGGGTAAAAACCTCGCGGGCGAAGCTTGACGATCCGAACAAACCGGTCGGCGTATTTATGCTCTGCGGGCCGTCCG
GCGTGGGCAAAACCGAAACCGCGCTGGCGCTGGCGGAGTCGCTTTACGGCGGCGAGCAGAACGTCATTACCATCAACATG
AGTGAATTCCAGGAAGCGCACACCGTTTCGACGTTAAAAGGTGCGCCTCCGGGCTATGTGGGCTATGGTGAAGGCGGCGT
CTTAACCGAGGCCGTGCGCCGCCGTCCCTACAGCGTGGTGCTGCTGGATGAAATTGAAAAAGCGCACCCGGACGTGCACG
AGATCTTCTTCCAGGTCTTCGACAAGGGCTGGATGGAGGACGGTGAAGGGCGTCACATTGATTTCCGTAACACTATTATT
ATTCTGACCTCTAATGTCGGTACCGAGCTGATCGCAGCCATGTGCGCCGACCCGGAACTGATGCCGGATCCTGATGCGTT
AAGTGGCGCCCTGCGCCAGCCGCTACTGGAGGTGTTCCCACCTGCGCTGCTGGGCCGCCTGCTGGTGGTGCCGTATTACC
CTCTGAGCGACGAGATGCTGGGGCAGATTGTGCGTCTTCAGCTCAGGCGCATTCAGCGTCGTCTGGAAGAGAATCACAAT
ATTATTTCTGAATTTGACGACAGCGTGGTCGAACAGATTGTTCAGCGCTGTACCGAGGTTGAGTCGGGCGGGCGTATGGT
GGATGCGATTCTGACCAATACGTTGCTGCCTCAGATGAGCCAGATTTTACTTACCGCCAGCCGCAGCGACGAGCAATACC
GACGTCTGCATGTCACCTGCGAGCAGGGCGAGTTCCACTGTCAGTTTGCCGCGTAA
ATGTCAGAAATTAGCCGTGCCGTGCTTTTCGGCAAACTGGATACGCTGTTATTTACCTCTCTGGAAAGCGCGACTGCCTT
CTGTAAGCTGCGCGGCAACCCGTACGTTGAGCTGGTGCACTGGCTGCATCAGCTGATGCAGCAGCAGGATGGCGATCTGC
AACAGGTCATCCGTCACTTCGCCCTTGATGAACAGCAGCTGACGCGCGATATCGTGGCGGCGCTGGATGCCCTGCCGCGT
GGCGCGAGTTCCGTCTCTGACCTTTCCGAGCATATCGACAGCGCCGTCGAGCGCGCCTGGGTCTACGGCTCGCTGAAGTT
TGGCGTCAGCCGCATCCGCGGCGGCCATTTGTTGATCGGCATACTGAAAACGTGGAATCTGGCTAACGTGCTGAAAAGTA
TTTCGGCGCAGTTCACCCGTCTTAACGTCGAGGTGCTGATCGAACAGTTCGACGCTATTTGCGCCAGCAGCAAAGAGAGC
CAGCAGGCCGCCGCCGCTGCGGACGCAGCTGCCGGGGCAGTACCGGCTGCGCAGGGCACGCTGGCGCAGTATGGTCAGGA
TCTGACGGCGCGCGCCCGGGATGGGAAAATTGACCCGGTGGTGGGGCGCGATGAAGAGATCCGCCAGATGGTCGATATTC
TGATGCGTCGTCGCCAGAACAACCCCCTGCTGACCGGGGAAGCTGGCGTCGGGAAAACGGCAGTGGTGGAAGGGCTGGCG
CTGCGTATCGCTGACGGCGACGTGCCTGAGCCGCTGCAAAACGTTCAGCTGTGGCTGCTGGATATCGGCATGCTTCAGGC
CGGAGCGGGCATGAAAGGGGAATTTGAGGCGCGCCTCCAGGCGCTGATTAACGAGGTGCAGTCCAGCGCCACGCCGATTA
TTCTGTTTATCGATGAGATCCACACCCTGATTGGCGCTGGCGGCCAGCAGGGTACCGGCGATGCCGCTAACCTGCTCAAG
CCTGCCCTGGCGCGTGGGCAACTGCGCACCATCGGCGCGACCACCTGGGCGGAATACAAAAAATACATTGAGAAAGATCC
GGCGCTGACCCGCCGTTTCCAGACCGTACAGGTTCACGAGCCGGATGAAGCGAAAGCTGTATTGATGCTGCGCAGCACCG
TGTCGCCGCTGGAAACTCATCATCAGGTTTTACTCCTCGACGAAGCGGTCAGCGCGGCGGTGAAACTGTCGCATCGCTAT
ATTCCTGCGCGTCAGCTGCCGGATAAAGCGGTGGCGCTGCTGGATACCGCCTGCGCGCGCGTGGCCGTCAGCCAGAGCGC
GCCGCCTGCCCAGCTGGAAGACTGCCTGCGTCATCTGGCGGCCCTGGACGTGGAGCTGGAGATTGCCGAACGTGAAGCGC
GCGTGGGGGCGGGCGATCCGGCGCGCGTGGCGACATTAAGCGCCGAACGTGACGCGTTCGAAACCCAACGCGAGGCCCTG
GCTCGTCGCTGGGAAGAAGAGCGCACGCGGGTGCAGGAAATTATCCGTCTGCGTGCCGCACTGTTTGCGGCGAGTGATGA
GGATACGGCTGAACTGCGCGGCCAGCTGACAGAACAGCAGCAGGCGCTGAAGACCTTACAGGGTGACGAACCGCTGCTGT
TTGCGGCGGTCGATGAAAACGTGGTGGCTGCGGTGGTCTCAGACTGGACCGGGATCCCGCTGGGCCGGATGGTGAAAAAT
GAGATCGACGCGGTGCTGAACCTGGCTGATACGCTGAACCAGCGGGTTATTGGTCAGCGTCACGGTCTGGATCTGATTGC
CCGTCGGGTAAAAACCTCGCGGGCGAAGCTTGACGATCCGAACAAACCGGTCGGCGTATTTATGCTCTGCGGGCCGTCCG
GCGTGGGCAAAACCGAAACCGCGCTGGCGCTGGCGGAGTCGCTTTACGGCGGCGAGCAGAACGTCATTACCATCAACATG
AGTGAATTCCAGGAAGCGCACACCGTTTCGACGTTAAAAGGTGCGCCTCCGGGCTATGTGGGCTATGGTGAAGGCGGCGT
CTTAACCGAGGCCGTGCGCCGCCGTCCCTACAGCGTGGTGCTGCTGGATGAAATTGAAAAAGCGCACCCGGACGTGCACG
AGATCTTCTTCCAGGTCTTCGACAAGGGCTGGATGGAGGACGGTGAAGGGCGTCACATTGATTTCCGTAACACTATTATT
ATTCTGACCTCTAATGTCGGTACCGAGCTGATCGCAGCCATGTGCGCCGACCCGGAACTGATGCCGGATCCTGATGCGTT
AAGTGGCGCCCTGCGCCAGCCGCTACTGGAGGTGTTCCCACCTGCGCTGCTGGGCCGCCTGCTGGTGGTGCCGTATTACC
CTCTGAGCGACGAGATGCTGGGGCAGATTGTGCGTCTTCAGCTCAGGCGCATTCAGCGTCGTCTGGAAGAGAATCACAAT
ATTATTTCTGAATTTGACGACAGCGTGGTCGAACAGATTGTTCAGCGCTGTACCGAGGTTGAGTCGGGCGGGCGTATGGT
GGATGCGATTCTGACCAATACGTTGCTGCCTCAGATGAGCCAGATTTTACTTACCGCCAGCCGCAGCGACGAGCAATACC
GACGTCTGCATGTCACCTGCGAGCAGGGCGAGTTCCACTGTCAGTTTGCCGCGTAA