Detailed information of component protein


Summary

Component ID T6CP207858
Component protein type TssG
T6SS ID (Type) T6SS13922 insolico (Type i2)
Strain Enterobacter sp. DSM 30060
Replicon chromosome
Sequence Protein sequence (362 a.a.); Nucleotide sequence (1086 bp)
Reference
-
insolico Bioinformatics investigation has been performed on this T6SS
External database links

Locus tag (Gene) HWQ15_RS20540
Coordinate (Strand) 4293871..4294956 (-)
NCBI ID WP_063149587.1
RefSeq NZ_CP056118
Uniprot ID -
KEGG ID -
PDB ID -
Pfam domain hit(s)

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Domain
Pfam ID
E-value
Aligned region
T6SS_TssGPF06996.132.5e-6420..320
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Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

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Prediction                
Region    
Sequence
Outside1-361MGREAQSPYSRLSPRLEADLHRMNFYRLCQLLEKRNPGRPLMGSTSHPGDDPVRFAPHPGMGFPASEMKAVEYDEEDDSRPPLIRTTFMGMYGVDSPLPTAYLDDIAQRREGHDALQGFLDIFSHRILTQFYRIWRKYSYPATFEPGGTDSISQSLLGLVGLGIPGTADHIATPVSRFLALLGVLQQPGKTQEGMQALVTLLAPETTVKVSPYCLRPVEIGQPLGFYGDDDFLLDGNTPLGDEAMDAGSQLLVALRTDNEQEALGWKPDGLLYQDFMVMLRVWLGWRFKAKLTLTTRTRLLAVPPLGEGPFWLGMNGVLGADEGEFTDDIPPTFTTELGYYTGLKPAISQQGNRRVTYKFN


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
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Prediction       
Probability
Cleavage site
Signal peptide sequence
Other0.9799--


  Protein sequence: 362 a.a.    

>T6CP207858 NZ_CP056118:c4294956-4293871 [Enterobacter sp. DSM 30060] [TssG]
MGREAQSPYSRLSPRLEADLHRMNFYRLCQLLEKRNPGRPLMGSTSHPGDDPVRFAPHPGMGFPASEMKAVEYDEEDDSR
PPLIRTTFMGMYGVDSPLPTAYLDDIAQRREGHDALQGFLDIFSHRILTQFYRIWRKYSYPATFEPGGTDSISQSLLGLV
GLGIPGTADHIATPVSRFLALLGVLQQPGKTQEGMQALVTLLAPETTVKVSPYCLRPVEIGQPLGFYGDDDFLLDGNTPL
GDEAMDAGSQLLVALRTDNEQEALGWKPDGLLYQDFMVMLRVWLGWRFKAKLTLTTRTRLLAVPPLGEGPFWLGMNGVLG
ADEGEFTDDIPPTFTTELGYYTGLKPAISQQGNRRVTYKFN*

  Nucleotide sequence: 1086 bp    

>T6CP207858 NZ_CP056118:c4294956-4293871 [Enterobacter sp. DSM 30060] [TssG]
ATGGGAAGAGAAGCACAATCGCCGTATTCCCGGCTGAGCCCACGGCTGGAAGCCGACCTGCATCGTATGAACTTTTACCG
TTTATGCCAGTTACTGGAGAAGCGTAACCCGGGCAGGCCGCTGATGGGCTCGACCAGTCACCCGGGAGATGATCCGGTAC
GCTTTGCCCCACATCCGGGGATGGGATTTCCGGCCAGTGAGATGAAAGCCGTGGAATATGATGAGGAGGATGACAGCCGG
CCACCACTCATCCGCACGACCTTTATGGGAATGTACGGTGTCGACTCACCCTTGCCGACGGCGTATCTCGATGACATCGC
TCAGCGTCGGGAAGGGCATGATGCACTACAGGGTTTTCTGGATATCTTCAGCCATCGCATTCTGACGCAGTTTTACCGTA
TCTGGCGTAAATACTCTTATCCTGCCACCTTTGAACCCGGTGGTACAGACAGCATCTCGCAGTCACTGCTGGGCCTGGTG
GGGCTGGGTATTCCCGGCACAGCAGACCACATTGCCACACCGGTATCCCGTTTTCTGGCTTTGCTGGGTGTCCTACAGCA
ACCGGGCAAAACGCAGGAGGGGATGCAGGCGCTGGTGACTTTGCTGGCCCCGGAAACCACCGTGAAGGTTAGCCCGTACT
GCCTGCGGCCGGTGGAAATTGGTCAGCCACTGGGCTTTTACGGTGATGACGATTTTCTGTTGGACGGCAACACGCCACTG
GGTGACGAAGCGATGGATGCGGGTAGCCAACTGCTGGTTGCGCTTAGGACGGATAATGAACAGGAGGCACTGGGCTGGAA
GCCGGACGGTCTGCTGTATCAGGACTTTATGGTGATGCTTCGTGTCTGGCTCGGTTGGCGTTTTAAGGCAAAACTCACCC
TGACCACCCGGACCCGACTTCTTGCCGTTCCGCCGCTTGGTGAAGGCCCTTTCTGGCTCGGGATGAACGGCGTGCTGGGG
GCTGATGAGGGGGAGTTTACAGACGATATCCCACCGACCTTTACGACGGAACTGGGCTATTACACCGGCCTGAAGCCGGC
AATATCACAACAAGGAAACCGACGTGTTACGTACAAGTTCAATTAA