Detailed information of component protein
Summary
Component ID | T6CP016245 |
Component protein type | TagH |
T6SS ID (Type) | T6SS01301 (Type i3) |
Strain | Burkholderia gladioli strain NGJ1 |
Replicon | chromosome |
Sequence | Protein sequence (695 a.a.); Nucleotide sequence (2085 bp) |
Reference |
External database links
Locus tag (Gene) | ACI79_RS29670 |
Coordinate (Strand) | 70545..72629 (+) |
NCBI ID | 920807630 |
GenBank | LEKY01000074 |
Uniprot ID | UPI00069E6CDD |
KEGG ID | - |
PDB ID | - |
Pfam domain hit(s)
Domain | Pfam ID | E-value | Aligned region |
---|---|---|---|
FHA | PF00498.28 | 4.7e-16 | 32..95 |
Transmembrane helices
- Transmembrane helices are predicted using TMHMM 2.0 software.
Prediction | Region | Sequence |
---|---|---|
Outside | 1-694 | MSTEPSLTLAVQGERAERLAQREQRFDRRDGSIGRADDCDWVLGAEGVSRLHALIRYLNGLYFVEDRSTNGMLLNGAPLRKGDPAALRDGDRLQIDTFEIAVRLGGETGGHWQDRQAQTDRAPTAPASTSTPRVPPAPAVPAAGAAALSSSSSAENREPLDLGALLSPRQLDAQGDAGRPDGLIPGARDAAVPGSSLDPLALFDAPSSYDDEAPGAVPADQGWNHTPSPSDRFRPPRVAGAHPAGALLPDDWDATGSRFTPPSAPSARQWDDSLLAPASNAAPAIPPAASGEGDSLLAPAPLRAAEAAAAMQSSASHQDDARPGSSPARAGGAAPVIPPSGSGEDDSLLGSIPPRAAGAASVPPSSARHQDDSSSDAISARARVAAPVPSPLHPDDSLPRSASVVPAAAQHDDALLDLIPARAADAAPVLPSSAPRHGDSLLAPIPAHAAEAPPLAPGNPAARYQATPATPAAPSAARAPAADAAPSTRAPAAAVESAAPVARPVAFGAAEASPRSQAASPAEPAGADLTAMFEIAVDAMMDVLRARAELKNSFRLPATLIQRSENNPLKFAPTAREAVRRLLAPPDNGFLAGSAALADAADDIRNHQMAMLAGVRSAFESLLVQFDPARIEQESEGGGRRLSLGGNRPRHWERYKEQFEALTRNPDECFRRLFGDEFARAYEQQLARLKQRRP |
Signal peptides
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction | Probability | Cleavage site | Signal peptide sequence |
---|---|---|---|
Other | 0.9835 | - | - |
Protein sequence: 695 a.a.
>T6CP016245 LEKY01000074:70545-72629 [Burkholderia gladioli] [TagH]
MSTEPSLTLAVQGERAERLAQREQRFDRRDGSIGRADDCDWVLGAEGVSRLHALIRYLNGLYFVEDRSTNGMLLNGAPLR
KGDPAALRDGDRLQIDTFEIAVRLGGETGGHWQDRQAQTDRAPTAPASTSTPRVPPAPAVPAAGAAALSSSSSAENREPL
DLGALLSPRQLDAQGDAGRPDGLIPGARDAAVPGSSLDPLALFDAPSSYDDEAPGAVPADQGWNHTPSPSDRFRPPRVAG
AHPAGALLPDDWDATGSRFTPPSAPSARQWDDSLLAPASNAAPAIPPAASGEGDSLLAPAPLRAAEAAAAMQSSASHQDD
ARPGSSPARAGGAAPVIPPSGSGEDDSLLGSIPPRAAGAASVPPSSARHQDDSSSDAISARARVAAPVPSPLHPDDSLPR
SASVVPAAAQHDDALLDLIPARAADAAPVLPSSAPRHGDSLLAPIPAHAAEAPPLAPGNPAARYQATPATPAAPSAARAP
AADAAPSTRAPAAAVESAAPVARPVAFGAAEASPRSQAASPAEPAGADLTAMFEIAVDAMMDVLRARAELKNSFRLPATL
IQRSENNPLKFAPTAREAVRRLLAPPDNGFLAGSAALADAADDIRNHQMAMLAGVRSAFESLLVQFDPARIEQESEGGGR
RLSLGGNRPRHWERYKEQFEALTRNPDECFRRLFGDEFARAYEQQLARLKQRRP*
MSTEPSLTLAVQGERAERLAQREQRFDRRDGSIGRADDCDWVLGAEGVSRLHALIRYLNGLYFVEDRSTNGMLLNGAPLR
KGDPAALRDGDRLQIDTFEIAVRLGGETGGHWQDRQAQTDRAPTAPASTSTPRVPPAPAVPAAGAAALSSSSSAENREPL
DLGALLSPRQLDAQGDAGRPDGLIPGARDAAVPGSSLDPLALFDAPSSYDDEAPGAVPADQGWNHTPSPSDRFRPPRVAG
AHPAGALLPDDWDATGSRFTPPSAPSARQWDDSLLAPASNAAPAIPPAASGEGDSLLAPAPLRAAEAAAAMQSSASHQDD
ARPGSSPARAGGAAPVIPPSGSGEDDSLLGSIPPRAAGAASVPPSSARHQDDSSSDAISARARVAAPVPSPLHPDDSLPR
SASVVPAAAQHDDALLDLIPARAADAAPVLPSSAPRHGDSLLAPIPAHAAEAPPLAPGNPAARYQATPATPAAPSAARAP
AADAAPSTRAPAAAVESAAPVARPVAFGAAEASPRSQAASPAEPAGADLTAMFEIAVDAMMDVLRARAELKNSFRLPATL
IQRSENNPLKFAPTAREAVRRLLAPPDNGFLAGSAALADAADDIRNHQMAMLAGVRSAFESLLVQFDPARIEQESEGGGR
RLSLGGNRPRHWERYKEQFEALTRNPDECFRRLFGDEFARAYEQQLARLKQRRP*
Nucleotide sequence: 2085 bp
>T6CP016245 LEKY01000074:70545-72629 [Burkholderia gladioli] [TagH]
ATGAGCACCGAACCGAGCCTGACCCTGGCGGTGCAGGGTGAACGCGCCGAGCGCCTCGCGCAGCGCGAGCAACGCTTCGA
CCGCCGCGACGGCAGCATCGGCCGCGCCGACGATTGCGACTGGGTGCTCGGCGCCGAGGGCGTGTCGCGGCTGCATGCGC
TGATCCGCTACCTGAACGGGCTCTACTTCGTCGAGGACCGCAGCACCAACGGCATGCTGCTGAACGGCGCGCCGCTGCGC
AAGGGCGACCCGGCGGCGCTGCGCGACGGCGACCGCCTGCAGATCGACACCTTCGAGATCGCGGTGCGGCTCGGCGGCGA
GACCGGCGGCCACTGGCAGGACCGGCAGGCGCAGACCGATCGCGCGCCGACGGCGCCGGCTTCGACGTCGACGCCGCGGG
TTCCGCCGGCGCCGGCCGTGCCGGCAGCCGGCGCGGCCGCGCTGTCGTCATCGTCGTCGGCCGAGAACCGCGAGCCGCTC
GATCTCGGCGCGCTGCTTTCGCCGCGCCAGCTCGATGCGCAGGGCGATGCGGGCCGTCCCGACGGCCTGATCCCCGGCGC
GCGCGATGCGGCCGTGCCGGGTTCGAGTCTCGATCCGCTCGCGCTGTTCGATGCCCCCTCGTCCTATGACGACGAGGCAC
CCGGCGCGGTGCCGGCCGACCAGGGCTGGAACCACACGCCGTCGCCCTCGGATCGATTCCGGCCGCCCCGGGTGGCGGGC
GCGCACCCGGCCGGCGCCTTGCTGCCCGACGATTGGGACGCCACCGGCAGCCGCTTCACGCCGCCGTCCGCGCCGTCCGC
TCGCCAGTGGGACGATTCGCTGCTCGCGCCCGCCTCGAATGCCGCGCCGGCGATTCCGCCCGCTGCTTCGGGCGAGGGCG
ATTCCTTGCTGGCGCCCGCGCCGCTGCGTGCCGCCGAGGCCGCGGCTGCGATGCAGTCGAGCGCCTCGCACCAGGACGAC
GCGCGGCCGGGTTCGAGCCCGGCGCGGGCGGGCGGTGCCGCGCCGGTGATTCCGCCGTCGGGCTCCGGCGAGGACGATTC
GCTGCTGGGTTCGATTCCGCCGCGTGCGGCTGGCGCTGCTTCGGTGCCGCCGTCCTCGGCCCGGCATCAGGACGATTCGT
CGTCGGATGCGATTTCGGCGCGCGCGAGGGTTGCCGCGCCGGTGCCGTCGCCATTGCATCCGGACGACTCGCTGCCGCGC
TCGGCGAGTGTCGTGCCGGCCGCCGCGCAGCATGACGATGCGCTGCTGGACCTGATCCCGGCGCGCGCGGCCGACGCCGC
GCCGGTGCTTCCGTCGTCTGCGCCGCGGCACGGCGATTCGCTGCTGGCCCCGATCCCGGCACATGCCGCCGAGGCACCGC
CGCTCGCGCCGGGCAACCCGGCCGCGCGCTATCAGGCCACCCCGGCCACCCCGGCCGCCCCGTCCGCCGCGCGGGCCCCG
GCCGCCGACGCCGCGCCGTCCACGCGTGCCCCGGCCGCCGCCGTGGAATCGGCGGCGCCAGTGGCGCGGCCCGTGGCCTT
CGGCGCGGCCGAAGCCTCGCCCCGCTCGCAGGCGGCATCGCCCGCCGAACCGGCCGGCGCCGACCTCACGGCGATGTTCG
AGATCGCCGTCGACGCGATGATGGACGTGCTGCGCGCGCGCGCCGAGCTGAAGAACAGCTTCCGCCTGCCGGCCACGCTG
ATCCAGCGCTCCGAGAACAACCCGCTGAAGTTCGCGCCCACCGCGCGCGAGGCCGTGCGCCGCCTGCTCGCGCCGCCCGA
CAACGGCTTCCTGGCCGGCAGCGCGGCGCTGGCCGACGCGGCCGACGACATCCGCAACCACCAGATGGCGATGCTGGCCG
GCGTGCGCTCGGCCTTCGAGTCCCTGCTCGTGCAGTTCGATCCGGCGCGCATCGAGCAGGAGTCCGAAGGCGGCGGGCGG
CGGCTCTCGCTGGGCGGCAACCGCCCGCGCCACTGGGAGCGCTACAAGGAGCAGTTCGAGGCGCTCACGCGCAATCCCGA
CGAATGCTTCCGGCGCCTGTTCGGCGACGAATTCGCGCGCGCCTACGAGCAACAACTGGCGCGCCTGAAGCAGCGCCGCC
CCTGA
ATGAGCACCGAACCGAGCCTGACCCTGGCGGTGCAGGGTGAACGCGCCGAGCGCCTCGCGCAGCGCGAGCAACGCTTCGA
CCGCCGCGACGGCAGCATCGGCCGCGCCGACGATTGCGACTGGGTGCTCGGCGCCGAGGGCGTGTCGCGGCTGCATGCGC
TGATCCGCTACCTGAACGGGCTCTACTTCGTCGAGGACCGCAGCACCAACGGCATGCTGCTGAACGGCGCGCCGCTGCGC
AAGGGCGACCCGGCGGCGCTGCGCGACGGCGACCGCCTGCAGATCGACACCTTCGAGATCGCGGTGCGGCTCGGCGGCGA
GACCGGCGGCCACTGGCAGGACCGGCAGGCGCAGACCGATCGCGCGCCGACGGCGCCGGCTTCGACGTCGACGCCGCGGG
TTCCGCCGGCGCCGGCCGTGCCGGCAGCCGGCGCGGCCGCGCTGTCGTCATCGTCGTCGGCCGAGAACCGCGAGCCGCTC
GATCTCGGCGCGCTGCTTTCGCCGCGCCAGCTCGATGCGCAGGGCGATGCGGGCCGTCCCGACGGCCTGATCCCCGGCGC
GCGCGATGCGGCCGTGCCGGGTTCGAGTCTCGATCCGCTCGCGCTGTTCGATGCCCCCTCGTCCTATGACGACGAGGCAC
CCGGCGCGGTGCCGGCCGACCAGGGCTGGAACCACACGCCGTCGCCCTCGGATCGATTCCGGCCGCCCCGGGTGGCGGGC
GCGCACCCGGCCGGCGCCTTGCTGCCCGACGATTGGGACGCCACCGGCAGCCGCTTCACGCCGCCGTCCGCGCCGTCCGC
TCGCCAGTGGGACGATTCGCTGCTCGCGCCCGCCTCGAATGCCGCGCCGGCGATTCCGCCCGCTGCTTCGGGCGAGGGCG
ATTCCTTGCTGGCGCCCGCGCCGCTGCGTGCCGCCGAGGCCGCGGCTGCGATGCAGTCGAGCGCCTCGCACCAGGACGAC
GCGCGGCCGGGTTCGAGCCCGGCGCGGGCGGGCGGTGCCGCGCCGGTGATTCCGCCGTCGGGCTCCGGCGAGGACGATTC
GCTGCTGGGTTCGATTCCGCCGCGTGCGGCTGGCGCTGCTTCGGTGCCGCCGTCCTCGGCCCGGCATCAGGACGATTCGT
CGTCGGATGCGATTTCGGCGCGCGCGAGGGTTGCCGCGCCGGTGCCGTCGCCATTGCATCCGGACGACTCGCTGCCGCGC
TCGGCGAGTGTCGTGCCGGCCGCCGCGCAGCATGACGATGCGCTGCTGGACCTGATCCCGGCGCGCGCGGCCGACGCCGC
GCCGGTGCTTCCGTCGTCTGCGCCGCGGCACGGCGATTCGCTGCTGGCCCCGATCCCGGCACATGCCGCCGAGGCACCGC
CGCTCGCGCCGGGCAACCCGGCCGCGCGCTATCAGGCCACCCCGGCCACCCCGGCCGCCCCGTCCGCCGCGCGGGCCCCG
GCCGCCGACGCCGCGCCGTCCACGCGTGCCCCGGCCGCCGCCGTGGAATCGGCGGCGCCAGTGGCGCGGCCCGTGGCCTT
CGGCGCGGCCGAAGCCTCGCCCCGCTCGCAGGCGGCATCGCCCGCCGAACCGGCCGGCGCCGACCTCACGGCGATGTTCG
AGATCGCCGTCGACGCGATGATGGACGTGCTGCGCGCGCGCGCCGAGCTGAAGAACAGCTTCCGCCTGCCGGCCACGCTG
ATCCAGCGCTCCGAGAACAACCCGCTGAAGTTCGCGCCCACCGCGCGCGAGGCCGTGCGCCGCCTGCTCGCGCCGCCCGA
CAACGGCTTCCTGGCCGGCAGCGCGGCGCTGGCCGACGCGGCCGACGACATCCGCAACCACCAGATGGCGATGCTGGCCG
GCGTGCGCTCGGCCTTCGAGTCCCTGCTCGTGCAGTTCGATCCGGCGCGCATCGAGCAGGAGTCCGAAGGCGGCGGGCGG
CGGCTCTCGCTGGGCGGCAACCGCCCGCGCCACTGGGAGCGCTACAAGGAGCAGTTCGAGGCGCTCACGCGCAATCCCGA
CGAATGCTTCCGGCGCCTGTTCGGCGACGAATTCGCGCGCGCCTACGAGCAACAACTGGCGCGCCTGAAGCAGCGCCGCC
CCTGA