Detailed information of component protein


Summary

Component ID T6CP015835
Component protein type TssG
T6SS ID (Type) T6SS01274 experimental (Type i2)
Strain Klebsiella pneumoniae subsp. pneumoniae ATCC 43816
Replicon chromosome
Sequence Protein sequence (362 a.a.); Nucleotide sequence (1086 bp)
Reference
experimental Experimental investigation has been performed on this T6SS

External database links

Locus tag (Gene) IT767_RS08520
Coordinate (Strand) 1759577..1760662 (-)
NCBI ID WP_004212345.1
RefSeq NZ_CP064352
Uniprot ID A0A2L1BZK9_KLEPN, A0A7M3G8Y6_KLEPN
KEGG ID kpt:VK055_1090
PDB ID -

Pfam domain hit(s)

Domain Pfam ID E-value Aligned region
T6SS_TssG PF06996.13 5.7e-63 21..320

Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Outside 1-361 MGREAQPPHSRLTPRLEADLPRINFYRFCQLLEKRRPGQPLMGGTSHPADDPVRFYPHPGMGFPASELKAVEYDEADDSRPPVIRTTFMGLYGVDSPLPTAYLDDIAQHREGHEALQGLLDIFSHRIMTQFYRIWRKYSWPATFEPGGTDRLSQSLLGLAGLGIPGTTQHIASPASRFLALTGVLRQPGKTQQGIQALVTLLAPETTVRVSPYSLRPVAISQPLGFYGDDDFFLDGNTPLGDEAMDASSQLLVALTTDNPAEAQGWKPDGPLFRDFLILLRVYLGWRFRANITLTAPTRLLAVPPLGDEPFWLGMNGVLGVGQGESEDDIPQTFTTELGTYTGLQPATFLQGNRRVTYKFD



Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
Other 0.9812 - -



  Protein sequence: 362 a.a.    

>T6CP015835 NZ_CP064352:c1760662-1759577 [Klebsiella pneumoniae subsp. pneumoniae ATCC 43816] [TssG]
MGREAQPPHSRLTPRLEADLPRINFYRFCQLLEKRRPGQPLMGGTSHPADDPVRFYPHPGMGFPASELKAVEYDEADDSR
PPVIRTTFMGLYGVDSPLPTAYLDDIAQHREGHEALQGLLDIFSHRIMTQFYRIWRKYSWPATFEPGGTDRLSQSLLGLA
GLGIPGTTQHIASPASRFLALTGVLRQPGKTQQGIQALVTLLAPETTVRVSPYSLRPVAISQPLGFYGDDDFFLDGNTPL
GDEAMDASSQLLVALTTDNPAEAQGWKPDGPLFRDFLILLRVYLGWRFRANITLTAPTRLLAVPPLGDEPFWLGMNGVLG
VGQGESEDDIPQTFTTELGTYTGLQPATFLQGNRRVTYKFD*

  Nucleotide sequence: 1086 bp    

>T6CP015835 NZ_CP064352:c1760662-1759577 [Klebsiella pneumoniae subsp. pneumoniae ATCC 43816] [TssG]
ATGGGAAGAGAAGCACAGCCGCCGCATTCCCGGCTGACCCCGCGACTGGAGGCCGACCTGCCGCGGATCAATTTTTACCG
CTTCTGCCAGCTTCTGGAAAAACGGCGTCCCGGCCAACCGCTGATGGGGGGAACCAGCCATCCGGCTGACGATCCGGTGC
GTTTTTACCCGCATCCGGGAATGGGATTTCCCGCCAGCGAACTGAAAGCCGTGGAATACGATGAGGCCGATGACAGCAGG
CCGCCGGTCATTCGCACCACCTTTATGGGGTTGTACGGTGTCGATTCGCCGCTCCCGACGGCATATCTCGATGATATCGC
CCAGCACAGGGAAGGGCATGAAGCGCTGCAGGGCTTACTGGATATCTTCAGCCACCGGATCATGACGCAGTTTTACCGCA
TCTGGCGGAAATACTCCTGGCCCGCCACCTTTGAGCCCGGCGGCACCGATCGTCTCTCGCAGTCGCTACTGGGCCTGGCG
GGGCTAGGCATCCCCGGCACGACGCAGCATATCGCCTCGCCGGCGTCGCGCTTTCTGGCGCTAACCGGCGTGCTGCGTCA
GCCGGGCAAAACCCAGCAGGGGATCCAGGCGCTGGTCACCCTGCTGGCCCCGGAGACCACCGTCAGGGTGAGCCCGTACA
GCCTGCGTCCGGTGGCGATCAGCCAGCCGCTGGGGTTTTACGGCGATGACGACTTCTTCCTGGACGGCAATACGCCGCTG
GGTGACGAAGCGATGGATGCCAGCAGCCAGCTCCTCGTCGCCCTTACCACCGACAATCCCGCGGAGGCGCAGGGCTGGAA
GCCTGACGGCCCGCTGTTTCGGGACTTTCTCATCCTGCTGCGGGTATACCTCGGCTGGCGATTCCGGGCCAACATCACCC
TGACCGCGCCGACCCGACTGCTGGCTGTCCCGCCGCTGGGGGACGAGCCGTTCTGGCTCGGTATGAACGGCGTGCTGGGC
GTGGGTCAGGGCGAGAGTGAGGACGATATTCCTCAGACCTTTACCACCGAGCTGGGTACCTATACGGGCCTGCAGCCTGC
CACCTTTCTACAAGGAAACCGACGTGTTACGTATAAGTTTGACTAA