Detailed information of component protein


Summary

Component ID T6CP015376
Component protein type TssG
T6SS ID (Type) T6SS01215 experimental (Type i2)
Strain Klebsiella pneumoniae strain Kp52.145
Replicon chromosome
Sequence Protein sequence (362 a.a.); Nucleotide sequence (1086 bp)
Reference
experimental Experimental investigation has been performed on this T6SS
External database links

Locus tag (Gene) BN49_RS14090
Coordinate (Strand) 2587801..2588886 (+)
NCBI ID WP_004190503.1
RefSeq NZ_FO834906
Uniprot ID A0A7U9CYK9_KLEPN, A0A652Q199_9ENTR, W9B806_KLEPN, A0A3F3B3D4_KLEPN
KEGG ID kpnk:BN49_2478, kpy:KPNIH31_11115
PDB ID -
Pfam domain hit(s)

Domain Pfam ID E-value Aligned region
T6SS_TssG PF06996.13 5.7e-63 21..320
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Outside 1-361 MGREAQPPHSRLTPRLEADLPRINFYRFCQLLEKRRPGQPLMGGTSHPADDPVRFYPHPGMGFPASELKAVEYDEADDSRPPVIRTTFMGLYGVDSPLPTAYLDDIAQHREGHEALQGLLDIFSHRIMTQFYRIWRKYSWPATFEPGGTDRLSQSLLGLAGLGIPGTTQHIASPASRFLALTGVLRQPGKTQQGIQALVTLLAPETTVRVSPYSLRPVAISQPLGFYGDDDFFLDGNTPLGDEAMDASSQLLVALTTDNPAEAQGWKPDGPLFRDFLILLRVYLGWRFRANITLTAPTRLLAVPPLGDEPFWLGMNGVLGVGEGESEGDIPQTFTTELGTYTGLQPATFLQGNRRVTYKFD


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
Other 0.9812 - -


  Protein sequence: 362 a.a.    

>T6CP015376 NZ_FO834906:2587801-2588886 [Klebsiella pneumoniae] [TssG]
MGREAQPPHSRLTPRLEADLPRINFYRFCQLLEKRRPGQPLMGGTSHPADDPVRFYPHPGMGFPASELKAVEYDEADDSR
PPVIRTTFMGLYGVDSPLPTAYLDDIAQHREGHEALQGLLDIFSHRIMTQFYRIWRKYSWPATFEPGGTDRLSQSLLGLA
GLGIPGTTQHIASPASRFLALTGVLRQPGKTQQGIQALVTLLAPETTVRVSPYSLRPVAISQPLGFYGDDDFFLDGNTPL
GDEAMDASSQLLVALTTDNPAEAQGWKPDGPLFRDFLILLRVYLGWRFRANITLTAPTRLLAVPPLGDEPFWLGMNGVLG
VGEGESEGDIPQTFTTELGTYTGLQPATFLQGNRRVTYKFD*

  Nucleotide sequence: 1086 bp    

>T6CP015376 NZ_FO834906:2587801-2588886 [Klebsiella pneumoniae] [TssG]
ATGGGAAGAGAAGCACAGCCGCCGCATTCCCGGCTGACCCCGCGACTGGAGGCCGACCTGCCGCGGATCAATTTTTACCG
CTTCTGCCAGCTTCTGGAAAAACGGCGTCCCGGCCAACCGCTGATGGGGGGAACCAGCCATCCGGCTGACGATCCGGTGC
GTTTTTACCCGCATCCGGGAATGGGATTTCCCGCCAGCGAACTGAAAGCCGTGGAATACGATGAGGCCGATGACAGCAGG
CCGCCGGTCATTCGCACCACCTTTATGGGGTTGTACGGTGTCGATTCGCCGCTCCCGACGGCATATCTCGATGATATCGC
CCAGCACAGGGAAGGGCATGAAGCGCTGCAGGGCTTACTGGATATCTTCAGCCACCGGATCATGACGCAGTTTTACCGCA
TCTGGCGGAAATACTCCTGGCCCGCCACCTTTGAGCCCGGCGGCACCGATCGTCTCTCGCAGTCGCTACTGGGCCTGGCG
GGGCTGGGCATCCCCGGCACGACGCAGCATATCGCCTCGCCGGCGTCGCGCTTTCTGGCGCTAACCGGCGTGCTGCGTCA
GCCGGGCAAAACCCAGCAGGGGATCCAGGCGCTGGTCACCCTGCTGGCCCCGGAGACCACCGTCAGGGTGAGCCCGTACA
GCCTGCGTCCGGTGGCGATCAGCCAGCCGCTGGGGTTTTACGGCGATGACGACTTCTTCCTGGACGGCAATACGCCGCTG
GGTGACGAAGCGATGGATGCCAGCAGCCAGCTCCTCGTCGCCCTTACCACCGACAATCCCGCGGAGGCGCAGGGCTGGAA
GCCTGACGGCCCGCTGTTTCGGGACTTTCTCATCCTGCTGCGGGTATACCTCGGCTGGCGATTCCGGGCCAACATCACCC
TGACCGCGCCGACCCGACTGCTGGCTGTCCCGCCGCTGGGGGACGAGCCGTTCTGGCTCGGTATGAACGGCGTGCTGGGC
GTGGGTGAGGGCGAGAGTGAGGGCGATATTCCTCAGACCTTTACCACCGAGCTGGGTACCTATACGGGCCTGCAGCCTGC
CACCTTTCTACAAGGAAACCGACGTGTTACGTATAAGTTTGACTAA