Detailed information of component protein
Summary
| Component ID | T6CP014007 |
| Component protein type | TssG |
| T6SS ID (Type) | T6SS01088  (Type i1) |
| Strain | Vibrio anguillarum strain MHK3 |
| Replicon | chromosome |
| Sequence | Protein sequence (341 a.a.); Nucleotide sequence (1023 bp) |
| Reference |
Experimental investigation has been performed on this T6SSExternal database links
| Locus tag (Gene) | CG015_RS14360 |
| Coordinate (Strand) | 258255..259277 (-) |
| NCBI ID | WP_026028436.1 |
| RefSeq | NZ_CP022469 |
| Uniprot ID | UPI00018258AF |
| KEGG ID | - |
| PDB ID | - |
Pfam domain hit(s)
| Domain | Pfam ID | E-value | Aligned region |
|---|---|---|---|
| T6SS_TssG | PF06996.13 | 8.3e-86 | 31..326 |
Transmembrane helices
- Transmembrane helices are predicted using TMHMM 2.0 software.
| Prediction | Region | Sequence |
|---|---|---|
| Outside | 1-340 | MGNTDRNAAIDLEMAAAAVPEPLLGLPSDVRTYNFYQLVELLQKLNAFNPESEDWERTCQLVFSANPSLGFAPADVTDLREFADERLILQTNFFGLTGAQSPLPGFILQQLVEEDPGGFKRPFLDFFNNRLINLVYRVWRKYRYYVRFQAGAQDQFSSQLFALVGLGDADLRGETPINWCKMLAYAGTLAGRSRSPQVVSGIIAHCFDLQEVSIRQWVRRKVRIEPYQQFCLGKQNGELGINSMLGESVMDCNGKFVICIKNLTRERFADFLPSGKEHQPLCKLVEFILREQMAYDLELTMHESEAPVMSLCHDSGVALGWSSFLGRDLADKSVLIQVRQ |
Signal peptides
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
| Prediction | Probability | Cleavage site | Signal peptide sequence |
|---|---|---|---|
| Other | 0.9799 | - | - |
Protein sequence: 341 a.a.
>T6CP014007 NZ_CP022469:c259277-258255 [Vibrio anguillarum] [TssG]
MGNTDRNAAIDLEMAAAAVPEPLLGLPSDVRTYNFYQLVELLQKLNAFNPESEDWERTCQLVFSANPSLGFAPADVTDLR
EFADERLILQTNFFGLTGAQSPLPGFILQQLVEEDPGGFKRPFLDFFNNRLINLVYRVWRKYRYYVRFQAGAQDQFSSQL
FALVGLGDADLRGETPINWCKMLAYAGTLAGRSRSPQVVSGIIAHCFDLQEVSIRQWVRRKVRIEPYQQFCLGKQNGELG
INSMLGESVMDCNGKFVICIKNLTRERFADFLPSGKEHQPLCKLVEFILREQMAYDLELTMHESEAPVMSLCHDSGVALG
WSSFLGRDLADKSVLIQVRQ*
MGNTDRNAAIDLEMAAAAVPEPLLGLPSDVRTYNFYQLVELLQKLNAFNPESEDWERTCQLVFSANPSLGFAPADVTDLR
EFADERLILQTNFFGLTGAQSPLPGFILQQLVEEDPGGFKRPFLDFFNNRLINLVYRVWRKYRYYVRFQAGAQDQFSSQL
FALVGLGDADLRGETPINWCKMLAYAGTLAGRSRSPQVVSGIIAHCFDLQEVSIRQWVRRKVRIEPYQQFCLGKQNGELG
INSMLGESVMDCNGKFVICIKNLTRERFADFLPSGKEHQPLCKLVEFILREQMAYDLELTMHESEAPVMSLCHDSGVALG
WSSFLGRDLADKSVLIQVRQ*
Nucleotide sequence: 1023 bp
>T6CP014007 NZ_CP022469:c259277-258255 [Vibrio anguillarum] [TssG]
ATGGGGAACACAGACAGGAATGCAGCCATTGATCTAGAGATGGCTGCGGCGGCTGTGCCGGAGCCTCTACTGGGTTTACC
AAGCGATGTACGAACGTACAACTTCTACCAGTTGGTGGAACTGCTGCAAAAACTTAATGCGTTTAATCCTGAATCAGAAG
ATTGGGAGCGGACATGCCAGTTGGTATTCAGTGCCAACCCCAGTTTAGGTTTTGCACCAGCGGACGTAACGGATTTACGT
GAGTTCGCGGATGAGCGCCTGATCCTACAAACCAATTTTTTTGGATTAACTGGGGCGCAGTCACCGTTGCCCGGTTTTAT
TTTGCAACAATTGGTCGAAGAAGATCCCGGTGGTTTCAAGCGGCCCTTTTTAGATTTTTTCAATAACCGGTTGATTAACC
TTGTATATCGCGTATGGCGAAAGTATCGCTATTACGTCCGTTTTCAAGCGGGTGCGCAGGATCAATTTTCATCACAGCTG
TTTGCTTTAGTCGGTTTGGGTGATGCGGACTTGCGCGGCGAAACACCGATAAATTGGTGCAAGATGCTGGCTTATGCGGG
CACTTTGGCTGGCCGAAGTCGTTCACCGCAAGTGGTGTCTGGCATCATCGCGCACTGTTTTGATCTGCAAGAAGTCAGTA
TTCGCCAGTGGGTTCGACGCAAAGTCCGGATAGAGCCTTATCAGCAGTTTTGCTTAGGTAAGCAGAATGGTGAGCTTGGG
ATCAACAGCATGTTGGGTGAGTCAGTGATGGACTGTAACGGTAAGTTTGTTATCTGTATCAAAAACTTAACTCGAGAACG
ATTTGCCGATTTTTTGCCATCAGGCAAAGAACATCAACCGCTGTGTAAGTTGGTGGAGTTTATTTTACGAGAGCAGATGG
CTTACGACCTTGAGCTGACCATGCACGAGAGCGAGGCTCCGGTGATGAGTTTATGTCATGACAGTGGTGTGGCTTTGGGT
TGGTCATCATTTTTAGGGCGCGATTTGGCGGACAAAAGCGTGCTTATACAAGTAAGGCAATAG
ATGGGGAACACAGACAGGAATGCAGCCATTGATCTAGAGATGGCTGCGGCGGCTGTGCCGGAGCCTCTACTGGGTTTACC
AAGCGATGTACGAACGTACAACTTCTACCAGTTGGTGGAACTGCTGCAAAAACTTAATGCGTTTAATCCTGAATCAGAAG
ATTGGGAGCGGACATGCCAGTTGGTATTCAGTGCCAACCCCAGTTTAGGTTTTGCACCAGCGGACGTAACGGATTTACGT
GAGTTCGCGGATGAGCGCCTGATCCTACAAACCAATTTTTTTGGATTAACTGGGGCGCAGTCACCGTTGCCCGGTTTTAT
TTTGCAACAATTGGTCGAAGAAGATCCCGGTGGTTTCAAGCGGCCCTTTTTAGATTTTTTCAATAACCGGTTGATTAACC
TTGTATATCGCGTATGGCGAAAGTATCGCTATTACGTCCGTTTTCAAGCGGGTGCGCAGGATCAATTTTCATCACAGCTG
TTTGCTTTAGTCGGTTTGGGTGATGCGGACTTGCGCGGCGAAACACCGATAAATTGGTGCAAGATGCTGGCTTATGCGGG
CACTTTGGCTGGCCGAAGTCGTTCACCGCAAGTGGTGTCTGGCATCATCGCGCACTGTTTTGATCTGCAAGAAGTCAGTA
TTCGCCAGTGGGTTCGACGCAAAGTCCGGATAGAGCCTTATCAGCAGTTTTGCTTAGGTAAGCAGAATGGTGAGCTTGGG
ATCAACAGCATGTTGGGTGAGTCAGTGATGGACTGTAACGGTAAGTTTGTTATCTGTATCAAAAACTTAACTCGAGAACG
ATTTGCCGATTTTTTGCCATCAGGCAAAGAACATCAACCGCTGTGTAAGTTGGTGGAGTTTATTTTACGAGAGCAGATGG
CTTACGACCTTGAGCTGACCATGCACGAGAGCGAGGCTCCGGTGATGAGTTTATGTCATGACAGTGGTGTGGCTTTGGGT
TGGTCATCATTTTTAGGGCGCGATTTGGCGGACAAAAGCGTGCTTATACAAGTAAGGCAATAG