Detailed information of component protein
Summary
| Component ID | T6CP013813 |
| Component protein type | TssK |
| T6SS ID (Type) | T6SS01070  (Type i4b) |
| Strain | Acinetobacter baumannii ATCC 17978 |
| Replicon | chromosome |
| Sequence | Protein sequence (455 a.a.); Nucleotide sequence (1365 bp) |
| Reference | - |
Bioinformatics investigation has been performed on this T6SSExternal database links
| Locus tag (Gene) | |
| Coordinate (Strand) | 2953958..2955322 (+) |
| NCBI ID | WP_000471450.1 |
| RefSeq | NZ_CP018664 |
| Uniprot ID | A0A3R9CPQ8_9GAMM, A0A0E1FFB9_ACIBA |
| KEGG ID | abau:IX87_03910, abk:LX00_06470 |
| PDB ID | - |
Pfam domain hit(s)
| Domain | Pfam ID | E-value | Aligned region |
|---|
Transmembrane helices
- Transmembrane helices are predicted using TMHMM 2.0 software.
| Prediction | Region | Sequence |
|---|
Signal peptides
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
| Prediction | Probability | Cleavage site | Signal peptide sequence |
|---|---|---|---|
| - | - |
Protein sequence: 455 a.a.
Nucleotide sequence: 1365 bp