Detailed information of component protein
Summary
Component ID | T6CP013559 |
Component protein type | TssG |
T6SS ID (Type) | T6SS01047 (Type i4b) |
Strain | Acinetobacter baumannii Ab04-mff |
Replicon | chromosome |
Sequence | Protein sequence (333 a.a.); Nucleotide sequence (999 bp) |
Reference | - |
External database links
Locus tag (Gene) | ACX61_RS11790 |
Coordinate (Strand) | 2461485..2462483 (-) |
NCBI ID | WP_031958289.1 |
RefSeq | NZ_CP012006 |
Uniprot ID | - |
KEGG ID | - |
PDB ID | - |
Pfam domain hit(s)
Domain | Pfam ID | E-value | Aligned region |
---|---|---|---|
T6SS_TssG | PF06996.13 | 1.1e-65 | 20..311 |
Transmembrane helices
- Transmembrane helices are predicted using TMHMM 2.0 software.
Prediction | Region | Sequence |
---|
Signal peptides
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction | Probability | Cleavage site | Signal peptide sequence |
---|---|---|---|
- | - |
Protein sequence: 333 a.a.
>T6CP013559 NZ_CP012006:c2462483-2461485 [Acinetobacter baumannii] [TssG]
MQSERWWQDSSVTAELFQRPKSFEFIQATRLLRHMPAIDAALSWSDYFKFETSFNLNFPATEIESLELVDERVHLTNLIV
GLTGIQGALPYTYTNKIKQAPRQQRAETKEFLSLFNHKLTSQYVESSITYHLPVRYEIENKNDYLDILHALNGYVRSQHQ
QQDLDEYFAEFSGLMQGQNNTVHALKTMLSCIFKHEITIKEFVQESFKLASDQLTTLGGSQPSLLGINTFCGETIQQIDG
KIEIQIGPLKRQQYLKFLPHQELSLKLKKIVETWCSPTLSIDLRLILDETEIQPVRLTQGQESGLGQGAFLMSRKPNTHN
DETCYSLIGEQI*
MQSERWWQDSSVTAELFQRPKSFEFIQATRLLRHMPAIDAALSWSDYFKFETSFNLNFPATEIESLELVDERVHLTNLIV
GLTGIQGALPYTYTNKIKQAPRQQRAETKEFLSLFNHKLTSQYVESSITYHLPVRYEIENKNDYLDILHALNGYVRSQHQ
QQDLDEYFAEFSGLMQGQNNTVHALKTMLSCIFKHEITIKEFVQESFKLASDQLTTLGGSQPSLLGINTFCGETIQQIDG
KIEIQIGPLKRQQYLKFLPHQELSLKLKKIVETWCSPTLSIDLRLILDETEIQPVRLTQGQESGLGQGAFLMSRKPNTHN
DETCYSLIGEQI*
Nucleotide sequence: 999 bp
>T6CP013559 NZ_CP012006:c2462483-2461485 [Acinetobacter baumannii] [TssG]
ATGCAGTCAGAACGTTGGTGGCAAGACTCTTCTGTAACGGCTGAGTTGTTTCAACGCCCTAAGTCTTTTGAGTTTATTCA
AGCAACACGTTTATTGCGTCATATGCCTGCCATTGACGCAGCTTTGTCATGGTCTGACTATTTTAAATTTGAGACCTCAT
TTAACTTAAACTTTCCAGCCACTGAAATTGAAAGTTTAGAGTTAGTAGATGAGCGTGTTCATTTAACAAACCTGATCGTT
GGTCTGACTGGTATACAAGGTGCATTACCTTATACATATACAAATAAAATTAAGCAGGCTCCAAGGCAACAACGCGCTGA
AACGAAAGAGTTTTTAAGCTTATTTAATCATAAGTTGACCAGTCAGTATGTAGAGTCAAGTATTACTTATCACTTGCCTG
TACGCTATGAAATTGAAAATAAAAATGATTATTTGGATATTCTCCATGCATTGAATGGCTATGTTCGCTCACAACATCAG
CAACAAGACTTGGATGAATATTTCGCTGAATTTTCAGGCCTAATGCAGGGACAAAATAATACGGTTCATGCTTTAAAGAC
GATGTTGAGTTGTATTTTTAAGCATGAAATTACAATTAAAGAGTTTGTACAGGAATCGTTTAAGTTAGCAAGTGATCAGC
TAACCACTTTAGGTGGAAGTCAACCGAGCTTACTTGGTATTAACACATTTTGTGGGGAAACGATTCAACAAATTGATGGA
AAAATTGAGATTCAAATAGGTCCGCTTAAGCGTCAGCAATATTTAAAATTTTTACCTCATCAAGAGCTTAGCTTAAAGCT
CAAAAAAATCGTAGAAACTTGGTGCAGTCCAACTTTATCGATAGATTTAAGATTGATATTGGATGAGACTGAAATACAAC
CTGTTCGCTTAACTCAAGGCCAAGAAAGTGGTCTAGGGCAAGGCGCTTTTTTAATGTCTCGTAAGCCTAATACACATAAC
GATGAAACATGTTATAGCCTTATTGGAGAGCAAATATGA
ATGCAGTCAGAACGTTGGTGGCAAGACTCTTCTGTAACGGCTGAGTTGTTTCAACGCCCTAAGTCTTTTGAGTTTATTCA
AGCAACACGTTTATTGCGTCATATGCCTGCCATTGACGCAGCTTTGTCATGGTCTGACTATTTTAAATTTGAGACCTCAT
TTAACTTAAACTTTCCAGCCACTGAAATTGAAAGTTTAGAGTTAGTAGATGAGCGTGTTCATTTAACAAACCTGATCGTT
GGTCTGACTGGTATACAAGGTGCATTACCTTATACATATACAAATAAAATTAAGCAGGCTCCAAGGCAACAACGCGCTGA
AACGAAAGAGTTTTTAAGCTTATTTAATCATAAGTTGACCAGTCAGTATGTAGAGTCAAGTATTACTTATCACTTGCCTG
TACGCTATGAAATTGAAAATAAAAATGATTATTTGGATATTCTCCATGCATTGAATGGCTATGTTCGCTCACAACATCAG
CAACAAGACTTGGATGAATATTTCGCTGAATTTTCAGGCCTAATGCAGGGACAAAATAATACGGTTCATGCTTTAAAGAC
GATGTTGAGTTGTATTTTTAAGCATGAAATTACAATTAAAGAGTTTGTACAGGAATCGTTTAAGTTAGCAAGTGATCAGC
TAACCACTTTAGGTGGAAGTCAACCGAGCTTACTTGGTATTAACACATTTTGTGGGGAAACGATTCAACAAATTGATGGA
AAAATTGAGATTCAAATAGGTCCGCTTAAGCGTCAGCAATATTTAAAATTTTTACCTCATCAAGAGCTTAGCTTAAAGCT
CAAAAAAATCGTAGAAACTTGGTGCAGTCCAACTTTATCGATAGATTTAAGATTGATATTGGATGAGACTGAAATACAAC
CTGTTCGCTTAACTCAAGGCCAAGAAAGTGGTCTAGGGCAAGGCGCTTTTTTAATGTCTCGTAAGCCTAATACACATAAC
GATGAAACATGTTATAGCCTTATTGGAGAGCAAATATGA