Detailed information of component protein
Summary
External database links
Locus tag (Gene) | PA14_RS17420 |
Coordinate (Strand) | 3811486..3812214 (-) |
NCBI ID | WP_003110437.1 |
RefSeq | NC_008463 |
Uniprot ID | A0A1C7BGP3_PSEAI, A0A0H2Z945_PSEAB, A0A3S3TZ81_PSEAI |
KEGG ID | pau:PA14_42890 |
PDB ID | - |
Pfam domain hit(s)
Domain | Pfam ID | E-value | Aligned region |
---|---|---|---|
PP2C_2 | PF13672.8 | 6.1e-15 | 18..202 |
Transmembrane helices
- Transmembrane helices are predicted using TMHMM 2.0 software.
Prediction | Region | Sequence |
---|---|---|
Outside | 1-242 | MQRTEPWRSAARTDRGKVRARNEDAFLDCPDRGLWVVADGMGGHQAGDLASRMIVTSLAELPARAGFDERLNAMRQCLHWLNRRLGEELTLSAERGDRIIGSTVVALVVEGSRAACVWVGDSRCYLWRGQRLYQLSRDHSLLQRLVDERRMDIEQARAYPSARALTRAVGASEQLVLDVLELEVHPGDVFLLCSDGLYEELSADALGRALSLASPQVAVERLFDGALSGAARDNLTAVVIRQ |
Signal peptides
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction | Probability | Cleavage site | Signal peptide sequence |
---|---|---|---|
Other | 0.9763 | - | - |
Protein sequence: 243 a.a.
>T6CP012462 NC_008463:c3812214-3811486 [Pseudomonas aeruginosa UCBPP-PA14] [Stp1]
MQRTEPWRSAARTDRGKVRARNEDAFLDCPDRGLWVVADGMGGHQAGDLASRMIVTSLAELPARAGFDERLNAMRQCLHW
LNRRLGEELTLSAERGDRIIGSTVVALVVEGSRAACVWVGDSRCYLWRGQRLYQLSRDHSLLQRLVDERRMDIEQARAYP
SARALTRAVGASEQLVLDVLELEVHPGDVFLLCSDGLYEELSADALGRALSLASPQVAVERLFDGALSGAARDNLTAVVI
RQ*
MQRTEPWRSAARTDRGKVRARNEDAFLDCPDRGLWVVADGMGGHQAGDLASRMIVTSLAELPARAGFDERLNAMRQCLHW
LNRRLGEELTLSAERGDRIIGSTVVALVVEGSRAACVWVGDSRCYLWRGQRLYQLSRDHSLLQRLVDERRMDIEQARAYP
SARALTRAVGASEQLVLDVLELEVHPGDVFLLCSDGLYEELSADALGRALSLASPQVAVERLFDGALSGAARDNLTAVVI
RQ*
Nucleotide sequence: 729 bp
>T6CP012462 NC_008463:c3812214-3811486 [Pseudomonas aeruginosa UCBPP-PA14] [Stp1]
ATGCAACGCACCGAGCCCTGGCGCAGCGCGGCGCGCACGGATCGCGGCAAGGTCCGCGCGCGCAACGAGGATGCCTTCCT
GGACTGCCCGGATCGCGGGCTCTGGGTGGTCGCCGATGGCATGGGCGGGCACCAGGCCGGCGACCTGGCCAGCCGGATGA
TCGTCACCAGCCTGGCGGAACTGCCGGCCCGGGCGGGATTCGACGAGCGCCTGAACGCGATGCGCCAGTGCCTGCACTGG
CTCAACCGGCGCCTGGGCGAGGAACTCACCCTCAGCGCCGAACGCGGCGACAGGATCATCGGCAGTACGGTGGTGGCGCT
GGTCGTGGAGGGTTCGCGGGCGGCCTGCGTGTGGGTCGGCGACAGCCGCTGCTACCTGTGGCGCGGCCAGCGGCTGTACC
AGCTGTCCCGCGACCACTCGCTGTTGCAGCGACTGGTCGACGAACGGCGGATGGATATCGAGCAGGCGCGCGCCTATCCC
TCGGCGCGCGCGCTGACCCGTGCCGTCGGCGCCAGCGAACAACTGGTGCTGGACGTGTTGGAACTGGAGGTGCATCCCGG
TGATGTCTTCCTGCTCTGCAGCGACGGGCTCTACGAAGAGCTGAGCGCCGATGCGCTGGGCCGCGCGTTGAGCCTGGCAT
CGCCGCAGGTGGCGGTGGAGCGGCTGTTCGACGGCGCCCTGAGCGGCGCCGCGCGGGACAACCTGACGGCCGTGGTGATC
CGTCAATGA
ATGCAACGCACCGAGCCCTGGCGCAGCGCGGCGCGCACGGATCGCGGCAAGGTCCGCGCGCGCAACGAGGATGCCTTCCT
GGACTGCCCGGATCGCGGGCTCTGGGTGGTCGCCGATGGCATGGGCGGGCACCAGGCCGGCGACCTGGCCAGCCGGATGA
TCGTCACCAGCCTGGCGGAACTGCCGGCCCGGGCGGGATTCGACGAGCGCCTGAACGCGATGCGCCAGTGCCTGCACTGG
CTCAACCGGCGCCTGGGCGAGGAACTCACCCTCAGCGCCGAACGCGGCGACAGGATCATCGGCAGTACGGTGGTGGCGCT
GGTCGTGGAGGGTTCGCGGGCGGCCTGCGTGTGGGTCGGCGACAGCCGCTGCTACCTGTGGCGCGGCCAGCGGCTGTACC
AGCTGTCCCGCGACCACTCGCTGTTGCAGCGACTGGTCGACGAACGGCGGATGGATATCGAGCAGGCGCGCGCCTATCCC
TCGGCGCGCGCGCTGACCCGTGCCGTCGGCGCCAGCGAACAACTGGTGCTGGACGTGTTGGAACTGGAGGTGCATCCCGG
TGATGTCTTCCTGCTCTGCAGCGACGGGCTCTACGAAGAGCTGAGCGCCGATGCGCTGGGCCGCGCGTTGAGCCTGGCAT
CGCCGCAGGTGGCGGTGGAGCGGCTGTTCGACGGCGCCCTGAGCGGCGCCGCGCGGGACAACCTGACGGCCGTGGTGATC
CGTCAATGA