Detailed information of component protein
Summary

External database links
Locus tag (Gene) | PA1671 |
Coordinate (Strand) | 1823326..1824315 (+) |
NCBI ID | NP_250362.1 |
RefSeq | NC_002516 |
Uniprot ID | Q9I354_PSEAE |
KEGG ID | pae:PA1671 |
PDB ID | - |
Pfam domain hit(s)
Domain | Pfam ID | E-value | Aligned region |
---|---|---|---|
Pkinase | PF00069.27 | 4.4e-38 | 51..305 |
Transmembrane helices
- Transmembrane helices are predicted using TMHMM 2.0 software.
Prediction | Region | Sequence |
---|---|---|
Outside | 1-329 | MNEPLSSLELLPEEEGGANLTYFAFAAPTASAPDLPAVLPGPLPDVLSGRYRLERMLGAGGMGTVYRARDLLHEQFGDPAPLVALKLLNESVAESPDASALLYSEFALTRRLRHPNVVRLFTFDVDTACQRAYIVMELMPGLPLDRLLCERPEGLPWSELSAIARPLLDVLAYVHEQGVLHGDLKPSNVMLGEEGVRLFDFGLGQAQAGILDGLPQLSRGRIDAWTPGYAAPELLEGAPLSPAADLYALACVLYELADGRHPFRRLPSNQAREQGLERQLRAPRHLPRRCWPALRTALSLDPERRCIGVRELQEALGARRSWLAGVLAR |
Signal peptides
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction | Probability | Cleavage site | Signal peptide sequence |
---|---|---|---|
Other | 0.9320 | - | - |
Protein sequence: 330 a.a.
>T6CP012423 NC_002516:1823326-1824315 [Pseudomonas aeruginosa PAO1] [Stk1]
MNEPLSSLELLPEEEGGANLTYFAFAAPTASAPDLPAVLPGPLPDVLSGRYRLERMLGAGGMGTVYRARDLLHEQFGDPA
PLVALKLLNESVAESPDASALLYSEFALTRRLRHPNVVRLFTFDVDTACQRAYIVMELMPGLPLDRLLCERPEGLPWSEL
SAIARPLLDVLAYVHEQGVLHGDLKPSNVMLGEEGVRLFDFGLGQAQAGILDGLPQLSRGRIDAWTPGYAAPELLEGAPL
SPAADLYALACVLYELADGRHPFRRLPSNQAREQGLERQLRAPRHLPRRCWPALRTALSLDPERRCIGVRELQEALGARR
SWLAGVLAR*
MNEPLSSLELLPEEEGGANLTYFAFAAPTASAPDLPAVLPGPLPDVLSGRYRLERMLGAGGMGTVYRARDLLHEQFGDPA
PLVALKLLNESVAESPDASALLYSEFALTRRLRHPNVVRLFTFDVDTACQRAYIVMELMPGLPLDRLLCERPEGLPWSEL
SAIARPLLDVLAYVHEQGVLHGDLKPSNVMLGEEGVRLFDFGLGQAQAGILDGLPQLSRGRIDAWTPGYAAPELLEGAPL
SPAADLYALACVLYELADGRHPFRRLPSNQAREQGLERQLRAPRHLPRRCWPALRTALSLDPERRCIGVRELQEALGARR
SWLAGVLAR*
Nucleotide sequence: 990 bp
>T6CP012423 NC_002516:1823326-1824315 [Pseudomonas aeruginosa PAO1] [Stk1]
ATGAACGAACCGCTGTCGTCGCTGGAGCTGCTGCCGGAGGAGGAGGGCGGCGCGAACCTGACCTATTTCGCCTTCGCCGC
CCCGACCGCCTCGGCGCCGGACCTGCCGGCGGTGTTGCCCGGTCCGCTGCCGGACGTTCTTTCCGGGCGCTACCGTCTGG
AGCGGATGCTCGGCGCCGGCGGCATGGGGACGGTCTACCGTGCCCGGGACCTGCTCCATGAGCAGTTCGGCGACCCGGCG
CCGCTGGTAGCGCTGAAGCTGCTCAACGAGTCGGTCGCCGAGTCACCCGACGCCAGCGCCTTGCTCTATAGCGAGTTCGC
CCTGACCCGGCGCTTGCGCCATCCGAACGTCGTGCGTCTGTTCACCTTCGACGTCGACACCGCATGCCAGCGCGCCTACA
TCGTCATGGAACTCATGCCTGGCCTGCCGCTCGACCGCCTGCTCTGCGAGCGTCCCGAAGGCCTGCCCTGGTCCGAGCTG
AGCGCGATCGCCCGGCCGTTGCTGGATGTTCTGGCCTACGTCCACGAACAAGGAGTACTGCATGGCGACCTGAAGCCGAG
CAACGTGATGCTCGGCGAAGAGGGCGTGCGGCTCTTCGACTTCGGCCTCGGCCAGGCGCAGGCAGGCATCCTGGATGGCC
TGCCGCAGCTCAGCCGGGGCCGCATCGACGCCTGGACTCCGGGCTACGCCGCTCCCGAACTGCTCGAGGGTGCGCCATTG
TCGCCGGCGGCCGACCTGTATGCGCTGGCCTGCGTCCTCTACGAACTGGCCGATGGTCGCCATCCGTTCCGCCGCCTGCC
CTCGAACCAGGCCCGGGAGCAGGGGCTGGAGCGCCAGCTGCGCGCGCCCAGACACCTGCCTCGGCGCTGCTGGCCGGCGC
TGCGTACCGCCCTGAGCCTCGACCCCGAACGGCGCTGCATCGGCGTCCGCGAATTGCAGGAAGCGCTGGGCGCGCGGCGT
TCCTGGCTGGCCGGCGTTCTTGCCCGTTGA
ATGAACGAACCGCTGTCGTCGCTGGAGCTGCTGCCGGAGGAGGAGGGCGGCGCGAACCTGACCTATTTCGCCTTCGCCGC
CCCGACCGCCTCGGCGCCGGACCTGCCGGCGGTGTTGCCCGGTCCGCTGCCGGACGTTCTTTCCGGGCGCTACCGTCTGG
AGCGGATGCTCGGCGCCGGCGGCATGGGGACGGTCTACCGTGCCCGGGACCTGCTCCATGAGCAGTTCGGCGACCCGGCG
CCGCTGGTAGCGCTGAAGCTGCTCAACGAGTCGGTCGCCGAGTCACCCGACGCCAGCGCCTTGCTCTATAGCGAGTTCGC
CCTGACCCGGCGCTTGCGCCATCCGAACGTCGTGCGTCTGTTCACCTTCGACGTCGACACCGCATGCCAGCGCGCCTACA
TCGTCATGGAACTCATGCCTGGCCTGCCGCTCGACCGCCTGCTCTGCGAGCGTCCCGAAGGCCTGCCCTGGTCCGAGCTG
AGCGCGATCGCCCGGCCGTTGCTGGATGTTCTGGCCTACGTCCACGAACAAGGAGTACTGCATGGCGACCTGAAGCCGAG
CAACGTGATGCTCGGCGAAGAGGGCGTGCGGCTCTTCGACTTCGGCCTCGGCCAGGCGCAGGCAGGCATCCTGGATGGCC
TGCCGCAGCTCAGCCGGGGCCGCATCGACGCCTGGACTCCGGGCTACGCCGCTCCCGAACTGCTCGAGGGTGCGCCATTG
TCGCCGGCGGCCGACCTGTATGCGCTGGCCTGCGTCCTCTACGAACTGGCCGATGGTCGCCATCCGTTCCGCCGCCTGCC
CTCGAACCAGGCCCGGGAGCAGGGGCTGGAGCGCCAGCTGCGCGCGCCCAGACACCTGCCTCGGCGCTGCTGGCCGGCGC
TGCGTACCGCCCTGAGCCTCGACCCCGAACGGCGCTGCATCGGCGTCCGCGAATTGCAGGAAGCGCTGGGCGCGCGGCGT
TCCTGGCTGGCCGGCGTTCTTGCCCGTTGA