Detailed information of component protein


Summary

Component ID T6CP004075
Component protein type TssG
T6SS ID (Type) T6SS00396 experimental (Type i2)
Strain Enterobacter cloacae subsp. cloacae ATCC 13047
Replicon chromosome
Sequence Protein sequence (362 a.a.); Nucleotide sequence (1086 bp)
Reference
experimental Experimental investigation has been performed on this T6SS
External database links

Locus tag (Gene) ECL_RS08960
Coordinate (Strand) 1842623..1843708 (+)
NCBI ID WP_013096442.1
RefSeq NC_014121
Uniprot ID A0A0H3CHK1_ENTCC
KEGG ID enc:ECL_01818
PDB ID -
Pfam domain hit(s)

Domain Pfam ID E-value Aligned region
T6SS_TssG PF06996.13 5.6e-64 20..320
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Outside 1-361 MGREAQSPHSRLTPRLEADLHRMNFYRFCQLLEKRHPGRPLMGSTSHPADDPVRFAPHPGMGFPAGELKCVEYDEDDDNTPPVIRATFMGMYGVDSPLPTAYLDDITQRREGHDALQGFLDIFSHRILTQFYRIWRKYSYPATFEPGGTDSISQSLLGLVGLGIPGTANHIATPVSRFLALLGVLQQPGKTQEGIQALVSLLAPDTTVTVSPYCLRPVEVSQPLGFYGDDDFLLDGNTPLGDEAMDASSQLLIALSTDNEQESQGWKPDGLLYQDFLVMLRVYLGWRFKAKITLTTLTRLLAVPPLGEGSFWLGMNGVLGAEEGAFADDIPQTFTTELGYYTGLQPATPQQGNRRVTYKFD


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
Other 0.9772 - -


  Protein sequence: 362 a.a.    

>T6CP004075 NC_014121:1842623-1843708 [Enterobacter cloacae subsp. cloacae ATCC 13047] [TssG]
MGREAQSPHSRLTPRLEADLHRMNFYRFCQLLEKRHPGRPLMGSTSHPADDPVRFAPHPGMGFPAGELKCVEYDEDDDNT
PPVIRATFMGMYGVDSPLPTAYLDDITQRREGHDALQGFLDIFSHRILTQFYRIWRKYSYPATFEPGGTDSISQSLLGLV
GLGIPGTANHIATPVSRFLALLGVLQQPGKTQEGIQALVSLLAPDTTVTVSPYCLRPVEVSQPLGFYGDDDFLLDGNTPL
GDEAMDASSQLLIALSTDNEQESQGWKPDGLLYQDFLVMLRVYLGWRFKAKITLTTLTRLLAVPPLGEGSFWLGMNGVLG
AEEGAFADDIPQTFTTELGYYTGLQPATPQQGNRRVTYKFD*

  Nucleotide sequence: 1086 bp    

>T6CP004075 NC_014121:1842623-1843708 [Enterobacter cloacae subsp. cloacae ATCC 13047] [TssG]
ATGGGAAGAGAAGCACAGTCGCCGCATTCCCGGCTGACCCCGCGGCTGGAAGCCGACCTGCACCGCATGAATTTTTATCG
TTTCTGTCAGTTGCTGGAGAAACGTCATCCGGGCAGGCCACTGATGGGTTCAACCAGTCATCCCGCAGATGATCCGGTAC
GCTTTGCACCGCATCCGGGGATGGGTTTTCCAGCCGGTGAACTGAAGTGTGTCGAATATGACGAAGACGATGACAACACA
CCTCCGGTTATTCGAGCGACCTTCATGGGGATGTACGGTGTCGATTCCCCCTTGCCGACGGCGTATCTTGATGACATCAC
TCAGCGCCGTGAAGGACATGATGCGCTGCAGGGGTTTCTGGATATCTTTAGCCACCGCATCCTGACGCAGTTTTACCGCA
TCTGGCGTAAGTACTCTTACCCGGCCACCTTTGAGCCCGGCGGGACCGACAGCATTTCGCAGTCGCTGCTGGGCCTGGTG
GGGCTGGGTATTCCCGGCACCGCGAACCACATTGCCACACCGGTATCCCGTTTTCTGGCTCTGCTGGGTGTACTTCAGCA
ACCGGGGAAAACCCAGGAGGGGATACAGGCCCTGGTGAGCCTGCTGGCACCGGATACCACTGTGACGGTCAGCCCGTACT
GCCTGCGTCCGGTGGAGGTCAGTCAGCCACTGGGTTTTTACGGTGATGACGATTTTCTACTGGATGGCAACACGCCACTT
GGAGATGAAGCGATGGATGCCAGCAGCCAGCTGCTGATCGCGCTGTCCACCGATAACGAACAGGAATCACAGGGATGGAA
ACCGGACGGTCTGCTGTATCAGGACTTCCTGGTGATGCTGCGTGTCTACCTTGGCTGGCGTTTTAAGGCAAAAATCACCC
TGACAACCCTAACCCGCCTGCTGGCCGTGCCACCGCTCGGTGAAGGATCTTTCTGGCTCGGCATGAATGGCGTACTGGGG
GCGGAGGAGGGAGCGTTTGCAGATGATATCCCGCAAACCTTTACGACGGAACTGGGCTATTACACTGGCCTGCAACCTGC
AACACCACAACAAGGAAACCGACGTGTTACGTACAAGTTTGATTAA