Detailed information of component protein
Summary

External database links
Locus tag (Gene) | BTH_RS27325 |
Coordinate (Strand) | 3414189..3415535 (+) |
NCBI ID | WP_009888581.1 |
RefSeq | NC_007651 |
Uniprot ID | Q2SUC5_BURTA, A0A7X3J780_BURTH |
KEGG ID | bte:BTH_I2967 |
PDB ID | - |
Pfam domain hit(s)
Domain | Pfam ID | E-value | Aligned region |
---|---|---|---|
T6SS_VasE | PF05936.14 | 1e-139 | 19..446 |
Transmembrane helices
- Transmembrane helices are predicted using TMHMM 2.0 software.
Prediction | Region | Sequence |
---|---|---|
Outside | 1-448 | MSYSAKVLWGEGLFLRPQHFQRQDAYHEARLFESIQAIQPYNWGVRSVRFDRDALGSNVLRASELSLVFPDGALYSAPQADELPPPIALDTLPEGINEFTFYLALHPLRETGSNYADSRDTGFVSRFVSEQASVADHFTDAAEADIMFLKTNVKLIAHSEPRDQLLSIPLVRVRRTATSGFEIDDSFVPPCLAIEASPILHQRLRQLIDALQAKVNALYGFHREPTKNIIEFRSGDIASFWLLHTASAAFATLAHLHQHSALHPERLFQELLRLAGQLMTFSKGYVLADLPAYRHDDPGPGFARLDSILRDLLETVISTRYFAITLEEVRPSFHVGRLDSGKIDDKTAFYLAVSADMPSVELVDAVPARFKVGAPDDVDKLVLSAMPGVRLAYTPQVPPAIPVRPGACYFALDARSPLYERMLQAQSAMIYAPSGINDLKFELIAVTS |
Signal peptides
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction | Probability | Cleavage site | Signal peptide sequence |
---|---|---|---|
Other | 0.9967 | - | - |
Protein sequence: 449 a.a.
>T6CP001095 NC_007651:3414189-3415535 [Burkholderia thailandensis E264] [TssK]
MSYSAKVLWGEGLFLRPQHFQRQDAYHEARLFESIQAIQPYNWGVRSVRFDRDALGSNVLRASELSLVFPDGALYSAPQA
DELPPPIALDTLPEGINEFTFYLALHPLRETGSNYADSRDTGFVSRFVSEQASVADHFTDAAEADIMFLKTNVKLIAHSE
PRDQLLSIPLVRVRRTATSGFEIDDSFVPPCLAIEASPILHQRLRQLIDALQAKVNALYGFHREPTKNIIEFRSGDIASF
WLLHTASAAFATLAHLHQHSALHPERLFQELLRLAGQLMTFSKGYVLADLPAYRHDDPGPGFARLDSILRDLLETVISTR
YFAITLEEVRPSFHVGRLDSGKIDDKTAFYLAVSADMPSVELVDAVPARFKVGAPDDVDKLVLSAMPGVRLAYTPQVPPA
IPVRPGACYFALDARSPLYERMLQAQSAMIYAPSGINDLKFELIAVTS*
MSYSAKVLWGEGLFLRPQHFQRQDAYHEARLFESIQAIQPYNWGVRSVRFDRDALGSNVLRASELSLVFPDGALYSAPQA
DELPPPIALDTLPEGINEFTFYLALHPLRETGSNYADSRDTGFVSRFVSEQASVADHFTDAAEADIMFLKTNVKLIAHSE
PRDQLLSIPLVRVRRTATSGFEIDDSFVPPCLAIEASPILHQRLRQLIDALQAKVNALYGFHREPTKNIIEFRSGDIASF
WLLHTASAAFATLAHLHQHSALHPERLFQELLRLAGQLMTFSKGYVLADLPAYRHDDPGPGFARLDSILRDLLETVISTR
YFAITLEEVRPSFHVGRLDSGKIDDKTAFYLAVSADMPSVELVDAVPARFKVGAPDDVDKLVLSAMPGVRLAYTPQVPPA
IPVRPGACYFALDARSPLYERMLQAQSAMIYAPSGINDLKFELIAVTS*
Nucleotide sequence: 1347 bp
>T6CP001095 NC_007651:3414189-3415535 [Burkholderia thailandensis E264] [TssK]
ATGAGTTATTCGGCCAAGGTGCTCTGGGGGGAAGGCCTCTTTCTGAGGCCGCAGCACTTTCAGCGGCAGGACGCATACCA
CGAAGCGCGCCTGTTCGAATCGATTCAGGCGATCCAGCCGTACAACTGGGGCGTGCGTTCGGTGCGGTTCGATCGCGACG
CACTCGGCAGCAACGTGCTGCGCGCGAGCGAACTGTCGCTCGTGTTCCCGGACGGCGCGCTCTACTCCGCGCCGCAAGCC
GATGAATTGCCGCCGCCCATCGCGCTCGACACGCTGCCCGAAGGCATCAACGAATTCACGTTCTATCTCGCATTGCACCC
GCTGCGCGAAACCGGCTCGAACTACGCGGACAGCCGCGACACCGGCTTCGTGTCGCGCTTCGTCAGCGAGCAGGCGAGCG
TCGCCGATCATTTCACCGACGCCGCCGAAGCCGACATCATGTTCCTGAAGACGAACGTGAAGCTGATCGCGCACAGCGAG
CCGCGCGACCAATTGCTGTCGATCCCGCTCGTGCGCGTGCGGCGCACCGCGACGTCCGGCTTCGAGATCGACGACAGCTT
CGTGCCGCCGTGCCTCGCGATCGAGGCGTCGCCGATCCTGCATCAACGCCTGCGGCAGCTGATCGACGCGTTGCAGGCGA
AAGTGAATGCGCTGTACGGCTTCCATCGCGAACCGACGAAGAACATCATCGAATTCCGATCGGGCGACATCGCATCATTC
TGGCTGCTGCATACGGCAAGCGCCGCGTTCGCGACGCTCGCGCACCTGCATCAGCATTCGGCGCTCCATCCGGAGCGGCT
GTTCCAGGAACTGCTGCGCCTCGCGGGCCAGTTGATGACGTTCTCGAAGGGCTACGTGCTCGCCGATCTGCCCGCGTACC
GGCACGACGATCCGGGCCCGGGCTTCGCGCGCCTCGATTCGATCCTGCGCGACCTGCTCGAAACCGTGATCTCGACGCGC
TACTTCGCGATCACGCTCGAGGAAGTGCGGCCGTCGTTCCATGTCGGGCGGCTCGATTCGGGCAAGATCGACGACAAGAC
CGCGTTCTATCTCGCTGTGTCGGCCGACATGCCGTCGGTCGAGCTCGTCGATGCCGTGCCCGCGCGCTTCAAGGTCGGCG
CGCCGGACGACGTCGACAAGCTCGTGCTGTCCGCGATGCCCGGCGTGCGCCTTGCGTATACGCCGCAGGTGCCGCCCGCG
ATCCCCGTGCGCCCGGGCGCATGCTATTTCGCACTCGATGCGCGCAGCCCGCTCTATGAGCGGATGCTGCAGGCCCAGTC
GGCGATGATCTATGCGCCGTCCGGAATCAACGATCTCAAATTCGAACTGATCGCCGTCACCTCATGA
ATGAGTTATTCGGCCAAGGTGCTCTGGGGGGAAGGCCTCTTTCTGAGGCCGCAGCACTTTCAGCGGCAGGACGCATACCA
CGAAGCGCGCCTGTTCGAATCGATTCAGGCGATCCAGCCGTACAACTGGGGCGTGCGTTCGGTGCGGTTCGATCGCGACG
CACTCGGCAGCAACGTGCTGCGCGCGAGCGAACTGTCGCTCGTGTTCCCGGACGGCGCGCTCTACTCCGCGCCGCAAGCC
GATGAATTGCCGCCGCCCATCGCGCTCGACACGCTGCCCGAAGGCATCAACGAATTCACGTTCTATCTCGCATTGCACCC
GCTGCGCGAAACCGGCTCGAACTACGCGGACAGCCGCGACACCGGCTTCGTGTCGCGCTTCGTCAGCGAGCAGGCGAGCG
TCGCCGATCATTTCACCGACGCCGCCGAAGCCGACATCATGTTCCTGAAGACGAACGTGAAGCTGATCGCGCACAGCGAG
CCGCGCGACCAATTGCTGTCGATCCCGCTCGTGCGCGTGCGGCGCACCGCGACGTCCGGCTTCGAGATCGACGACAGCTT
CGTGCCGCCGTGCCTCGCGATCGAGGCGTCGCCGATCCTGCATCAACGCCTGCGGCAGCTGATCGACGCGTTGCAGGCGA
AAGTGAATGCGCTGTACGGCTTCCATCGCGAACCGACGAAGAACATCATCGAATTCCGATCGGGCGACATCGCATCATTC
TGGCTGCTGCATACGGCAAGCGCCGCGTTCGCGACGCTCGCGCACCTGCATCAGCATTCGGCGCTCCATCCGGAGCGGCT
GTTCCAGGAACTGCTGCGCCTCGCGGGCCAGTTGATGACGTTCTCGAAGGGCTACGTGCTCGCCGATCTGCCCGCGTACC
GGCACGACGATCCGGGCCCGGGCTTCGCGCGCCTCGATTCGATCCTGCGCGACCTGCTCGAAACCGTGATCTCGACGCGC
TACTTCGCGATCACGCTCGAGGAAGTGCGGCCGTCGTTCCATGTCGGGCGGCTCGATTCGGGCAAGATCGACGACAAGAC
CGCGTTCTATCTCGCTGTGTCGGCCGACATGCCGTCGGTCGAGCTCGTCGATGCCGTGCCCGCGCGCTTCAAGGTCGGCG
CGCCGGACGACGTCGACAAGCTCGTGCTGTCCGCGATGCCCGGCGTGCGCCTTGCGTATACGCCGCAGGTGCCGCCCGCG
ATCCCCGTGCGCCCGGGCGCATGCTATTTCGCACTCGATGCGCGCAGCCCGCTCTATGAGCGGATGCTGCAGGCCCAGTC
GGCGATGATCTATGCGCCGTCCGGAATCAACGATCTCAAATTCGAACTGATCGCCGTCACCTCATGA