Detailed information of component protein
Summary

External database links
Locus tag (Gene) | BTH_RS27285 |
Coordinate (Strand) | 3406242..3407342 (-) |
NCBI ID | WP_009888601.1 |
RefSeq | NC_007651 |
Uniprot ID | Q2SUD3_BURTA, A0A7X3DYF6_BURTH |
KEGG ID | bte:BTH_I2959 |
PDB ID | - |
Pfam domain hit(s)
Domain | Pfam ID | E-value | Aligned region |
---|---|---|---|
T6SS_TssG | PF06996.13 | 2.5e-92 | 19..346 |
Transmembrane helices
- Transmembrane helices are predicted using TMHMM 2.0 software.
Prediction | Region | Sequence |
---|---|---|
Outside | 1-366 | MQTAQRRIDPGVVERLLDEPHRFEFFQAVRLLETWFAKRHPQRHAASRPGEIVARRIGFRNTLSLGFPPSEIERAQSYDAAGDALKDDSQRNAALEAGALSRVELTPAFFGLLGGQGALPLHYTEQIIAREQLKRDHAARAFFDVFSNRATALFYSAWKKYRLPLHYELDRDERYLPLLLALAGVSNDDARSTVQQGRGALLDEAIAGYALAARHRPVSAAYLQRTLSEYFGVPIRIEQFVGKWYDVPSDQLSVLGDVNVTLGATALVGERVWQRDMRARLVVGPLTKRDYEAFLPGEERAIALERMLTLLAGVTLEYEVSLVLRRAEVGASVLGVGARLGWDAFLCTREAERDRADARYELHVIH |
Signal peptides
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction | Probability | Cleavage site | Signal peptide sequence |
---|---|---|---|
Other | 0.9873 | - | - |
Protein sequence: 367 a.a.
>T6CP001088 NC_007651:c3407342-3406242 [Burkholderia thailandensis E264] [TssG]
MQTAQRRIDPGVVERLLDEPHRFEFFQAVRLLETWFAKRHPQRHAASRPGEIVARRIGFRNTLSLGFPPSEIERAQSYDA
AGDALKDDSQRNAALEAGALSRVELTPAFFGLLGGQGALPLHYTEQIIAREQLKRDHAARAFFDVFSNRATALFYSAWKK
YRLPLHYELDRDERYLPLLLALAGVSNDDARSTVQQGRGALLDEAIAGYALAARHRPVSAAYLQRTLSEYFGVPIRIEQF
VGKWYDVPSDQLSVLGDVNVTLGATALVGERVWQRDMRARLVVGPLTKRDYEAFLPGEERAIALERMLTLLAGVTLEYEV
SLVLRRAEVGASVLGVGARLGWDAFLCTREAERDRADARYELHVIH*
MQTAQRRIDPGVVERLLDEPHRFEFFQAVRLLETWFAKRHPQRHAASRPGEIVARRIGFRNTLSLGFPPSEIERAQSYDA
AGDALKDDSQRNAALEAGALSRVELTPAFFGLLGGQGALPLHYTEQIIAREQLKRDHAARAFFDVFSNRATALFYSAWKK
YRLPLHYELDRDERYLPLLLALAGVSNDDARSTVQQGRGALLDEAIAGYALAARHRPVSAAYLQRTLSEYFGVPIRIEQF
VGKWYDVPSDQLSVLGDVNVTLGATALVGERVWQRDMRARLVVGPLTKRDYEAFLPGEERAIALERMLTLLAGVTLEYEV
SLVLRRAEVGASVLGVGARLGWDAFLCTREAERDRADARYELHVIH*
Nucleotide sequence: 1101 bp
>T6CP001088 NC_007651:c3407342-3406242 [Burkholderia thailandensis E264] [TssG]
ATGCAAACCGCGCAGCGGCGAATCGATCCTGGCGTAGTCGAGCGGCTGCTCGACGAGCCGCATCGCTTCGAGTTCTTCCA
GGCAGTGCGGCTGCTCGAGACCTGGTTCGCGAAGCGCCATCCGCAACGCCATGCTGCGAGCCGGCCGGGCGAGATCGTCG
CGCGGCGGATCGGTTTTCGCAATACGCTGTCGCTCGGCTTTCCGCCGAGCGAGATCGAGCGCGCGCAATCGTATGACGCA
GCGGGCGACGCGCTGAAGGACGATTCGCAGCGCAACGCGGCGCTCGAGGCGGGCGCGCTGTCGCGCGTCGAGCTCACGCC
GGCGTTCTTCGGGCTGCTGGGCGGCCAGGGCGCGCTGCCGCTGCATTACACCGAGCAGATCATCGCGCGCGAGCAATTGA
AGCGCGATCACGCGGCGCGCGCATTCTTCGATGTCTTCTCGAACCGCGCGACCGCGCTGTTCTACTCGGCGTGGAAGAAG
TACCGTTTGCCGCTGCATTACGAGCTCGATCGCGACGAGCGCTATTTACCCCTCTTGCTCGCGCTCGCGGGCGTGTCGAA
CGACGATGCGCGCTCGACCGTGCAGCAGGGCCGCGGCGCGCTGCTCGATGAAGCGATCGCCGGCTATGCGCTCGCCGCGC
GGCATCGGCCGGTGTCGGCCGCGTATCTGCAGCGCACGCTGTCCGAGTATTTCGGCGTGCCGATCCGCATCGAGCAGTTC
GTCGGCAAGTGGTATGACGTGCCGTCCGATCAACTGAGCGTGCTGGGCGACGTGAACGTGACGCTCGGCGCGACGGCGCT
CGTCGGCGAACGCGTATGGCAGCGCGACATGCGCGCGAGGCTCGTCGTCGGCCCGCTGACGAAGCGCGACTACGAGGCGT
TCCTGCCCGGCGAGGAGCGCGCGATCGCACTCGAGCGAATGCTGACGCTGCTCGCCGGCGTGACGCTCGAGTACGAAGTG
TCGCTCGTGCTGCGCCGCGCGGAGGTCGGCGCGAGCGTTCTCGGCGTGGGCGCGCGGCTCGGCTGGGATGCGTTTCTCTG
CACGCGTGAAGCCGAGCGTGATCGCGCCGACGCACGCTACGAACTGCACGTCATTCATTGA
ATGCAAACCGCGCAGCGGCGAATCGATCCTGGCGTAGTCGAGCGGCTGCTCGACGAGCCGCATCGCTTCGAGTTCTTCCA
GGCAGTGCGGCTGCTCGAGACCTGGTTCGCGAAGCGCCATCCGCAACGCCATGCTGCGAGCCGGCCGGGCGAGATCGTCG
CGCGGCGGATCGGTTTTCGCAATACGCTGTCGCTCGGCTTTCCGCCGAGCGAGATCGAGCGCGCGCAATCGTATGACGCA
GCGGGCGACGCGCTGAAGGACGATTCGCAGCGCAACGCGGCGCTCGAGGCGGGCGCGCTGTCGCGCGTCGAGCTCACGCC
GGCGTTCTTCGGGCTGCTGGGCGGCCAGGGCGCGCTGCCGCTGCATTACACCGAGCAGATCATCGCGCGCGAGCAATTGA
AGCGCGATCACGCGGCGCGCGCATTCTTCGATGTCTTCTCGAACCGCGCGACCGCGCTGTTCTACTCGGCGTGGAAGAAG
TACCGTTTGCCGCTGCATTACGAGCTCGATCGCGACGAGCGCTATTTACCCCTCTTGCTCGCGCTCGCGGGCGTGTCGAA
CGACGATGCGCGCTCGACCGTGCAGCAGGGCCGCGGCGCGCTGCTCGATGAAGCGATCGCCGGCTATGCGCTCGCCGCGC
GGCATCGGCCGGTGTCGGCCGCGTATCTGCAGCGCACGCTGTCCGAGTATTTCGGCGTGCCGATCCGCATCGAGCAGTTC
GTCGGCAAGTGGTATGACGTGCCGTCCGATCAACTGAGCGTGCTGGGCGACGTGAACGTGACGCTCGGCGCGACGGCGCT
CGTCGGCGAACGCGTATGGCAGCGCGACATGCGCGCGAGGCTCGTCGTCGGCCCGCTGACGAAGCGCGACTACGAGGCGT
TCCTGCCCGGCGAGGAGCGCGCGATCGCACTCGAGCGAATGCTGACGCTGCTCGCCGGCGTGACGCTCGAGTACGAAGTG
TCGCTCGTGCTGCGCCGCGCGGAGGTCGGCGCGAGCGTTCTCGGCGTGGGCGCGCGGCTCGGCTGGGATGCGTTTCTCTG
CACGCGTGAAGCCGAGCGTGATCGCGCCGACGCACGCTACGAACTGCACGTCATTCATTGA