Detailed information of component protein
Summary

External database links
Locus tag (Gene) | BTH_RS27280 |
Coordinate (Strand) | 3403545..3406208 (-) |
NCBI ID | WP_009910486.1 |
RefSeq | NC_007651 |
Uniprot ID | Q2SUD4_BURTA, A0A7X3DYH1_BURTH |
KEGG ID | bte:BTH_I2958 |
PDB ID | - |
Pfam domain hit(s)
Domain | Pfam ID | E-value | Aligned region |
---|---|---|---|
AAA_2 | PF07724.16 | 1.7e-42 | 617..786 |
AAA_lid_9 | PF17871.3 | 1.7e-28 | 372..470 |
ClpB_D2-small | PF10431.11 | 4.3e-11 | 792..867 |
Clp_N | PF02861.22 | 8.7e-11 | 29..74 |
AAA | PF00004.31 | 9.6e-10 | 230..342 |
Transmembrane helices
- Transmembrane helices are predicted using TMHMM 2.0 software.
Prediction | Region | Sequence |
---|---|---|
Outside | 1-887 | MSTPLKTLIAKLNPVCRKAAERAASHCFARGHYEVDLEHLFLALLDESTGDVPLVLRASGVDPHALRADLERELEGLKAGNTRTPVFSVHLTELFEQAWLIASLDSQIGRIRSGHLLLALLTGPDLAQFAQRMSPQFARVRIDDLKHKFDEITAGSIETEPRQAEADIAVPDGAAADSPRGPSKTPALDTYTTNLTQRASEGKIDPVIGRDAEIRQAIDILMRRRQNNPIMTGEAGVGKTAVVEGLALKIAADDVPPPLSGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKIDEPSEPLAAAMLRGMAGLMEQHFNVRILDNAITEAVRLSHRYISGRQLPDKAISVLDTACAKVALAHSATPAAIDDAKKRIERIDAEIAALEREAASGAAHDERLAELRAEREADLKALAEDEARYEEERALVTEIGALRAELDAAREPSADGRPADIDATRAKLAERVDALRALQGNQPMVPLQVDGHVIAEIVASWTGIPLGRMVKDEIETVLNLRDLLGARVIGQDHALDAIAQRVRTATANLEDPNKPRGVFMFVGPSGVGKTETALALADVLYGGERKMITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGAMDDAEGREIDFRNTLIILTSNVGSPAVMQACLNKTQEELPDAETLAETLRPQLYKTFKPAFLGRMKVIPYYPISDDVLAEIIELKLERIRRRIEANHKAAFEWDESLVDAVLARCTEVDSGARNVDHILNGTLLPEIAEHVLSRIADGEAIARIAARAAETGEFEYTVE |
Signal peptides
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction | Probability | Cleavage site | Signal peptide sequence |
---|---|---|---|
Other | 0.9927 | - | - |
Protein sequence: 888 a.a.
>T6CP001087 NC_007651:c3406208-3403545 [Burkholderia thailandensis E264] [TssH]
MSTPLKTLIAKLNPVCRKAAERAASHCFARGHYEVDLEHLFLALLDESTGDVPLVLRASGVDPHALRADLERELEGLKAG
NTRTPVFSVHLTELFEQAWLIASLDSQIGRIRSGHLLLALLTGPDLAQFAQRMSPQFARVRIDDLKHKFDEITAGSIETE
PRQAEADIAVPDGAAADSPRGPSKTPALDTYTTNLTQRASEGKIDPVIGRDAEIRQAIDILMRRRQNNPIMTGEAGVGKT
AVVEGLALKIAADDVPPPLSGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAGQN
DAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKIDEPSEPLAAAMLRGMAGLMEQHFNVRILDNAITEA
VRLSHRYISGRQLPDKAISVLDTACAKVALAHSATPAAIDDAKKRIERIDAEIAALEREAASGAAHDERLAELRAEREAD
LKALAEDEARYEEERALVTEIGALRAELDAAREPSADGRPADIDATRAKLAERVDALRALQGNQPMVPLQVDGHVIAEIV
ASWTGIPLGRMVKDEIETVLNLRDLLGARVIGQDHALDAIAQRVRTATANLEDPNKPRGVFMFVGPSGVGKTETALALAD
VLYGGERKMITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGAMD
DAEGREIDFRNTLIILTSNVGSPAVMQACLNKTQEELPDAETLAETLRPQLYKTFKPAFLGRMKVIPYYPISDDVLAEII
ELKLERIRRRIEANHKAAFEWDESLVDAVLARCTEVDSGARNVDHILNGTLLPEIAEHVLSRIADGEAIARIAARAAETG
EFEYTVE*
MSTPLKTLIAKLNPVCRKAAERAASHCFARGHYEVDLEHLFLALLDESTGDVPLVLRASGVDPHALRADLERELEGLKAG
NTRTPVFSVHLTELFEQAWLIASLDSQIGRIRSGHLLLALLTGPDLAQFAQRMSPQFARVRIDDLKHKFDEITAGSIETE
PRQAEADIAVPDGAAADSPRGPSKTPALDTYTTNLTQRASEGKIDPVIGRDAEIRQAIDILMRRRQNNPIMTGEAGVGKT
AVVEGLALKIAADDVPPPLSGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAGQN
DAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKIDEPSEPLAAAMLRGMAGLMEQHFNVRILDNAITEA
VRLSHRYISGRQLPDKAISVLDTACAKVALAHSATPAAIDDAKKRIERIDAEIAALEREAASGAAHDERLAELRAEREAD
LKALAEDEARYEEERALVTEIGALRAELDAAREPSADGRPADIDATRAKLAERVDALRALQGNQPMVPLQVDGHVIAEIV
ASWTGIPLGRMVKDEIETVLNLRDLLGARVIGQDHALDAIAQRVRTATANLEDPNKPRGVFMFVGPSGVGKTETALALAD
VLYGGERKMITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGAMD
DAEGREIDFRNTLIILTSNVGSPAVMQACLNKTQEELPDAETLAETLRPQLYKTFKPAFLGRMKVIPYYPISDDVLAEII
ELKLERIRRRIEANHKAAFEWDESLVDAVLARCTEVDSGARNVDHILNGTLLPEIAEHVLSRIADGEAIARIAARAAETG
EFEYTVE*
Nucleotide sequence: 2664 bp
>T6CP001087 NC_007651:c3406208-3403545 [Burkholderia thailandensis E264] [TssH]
ATGAGCACGCCCCTGAAGACCCTGATCGCGAAACTGAATCCGGTGTGCCGGAAGGCCGCCGAACGCGCCGCCAGCCATTG
CTTCGCACGCGGTCACTACGAAGTGGATCTCGAGCACTTGTTTCTCGCGCTGCTCGACGAATCGACCGGAGACGTGCCGC
TCGTGTTGCGCGCGAGCGGCGTCGATCCGCACGCGCTGCGCGCGGACCTCGAGCGCGAGCTTGAAGGCCTGAAGGCGGGC
AACACGCGTACGCCGGTGTTCTCGGTGCATCTGACCGAGCTGTTCGAGCAGGCGTGGCTCATCGCGTCGCTCGATTCGCA
GATCGGACGGATTCGCTCGGGCCACCTGCTGCTCGCGCTGCTGACGGGGCCGGATCTCGCGCAGTTCGCGCAGCGGATGT
CGCCGCAGTTCGCGCGCGTGAGAATCGATGACCTGAAGCACAAGTTCGACGAGATCACGGCGGGCTCGATCGAGACCGAG
CCGCGACAAGCGGAAGCCGACATCGCGGTGCCGGACGGCGCGGCGGCGGACTCGCCGCGCGGCCCGTCGAAGACGCCGGC
GCTCGACACGTATACGACGAACCTCACGCAGCGCGCGAGCGAAGGCAAGATCGATCCGGTGATCGGCCGCGACGCGGAGA
TTCGCCAGGCGATCGACATCCTGATGCGCCGCCGGCAGAACAATCCGATCATGACGGGTGAGGCGGGCGTCGGCAAGACG
GCCGTCGTCGAAGGGCTCGCGCTGAAGATCGCGGCCGACGACGTGCCGCCGCCGCTTTCCGGCGTCGCGTTGCACGTGCT
CGACATGGGTTTGCTGCAGGCGGGCGCAAGCGTGAAGGGCGAGTTCGAGAATCGCCTGAAGAGCGTGATCGACGAAGTGA
AGAAGAGCGCGCACCCGATCATCCTCTTCATCGACGAAGCGCACACGATCATCGGCGCGGGCGGGCAGGCCGGCCAGAAC
GACGCGGCTAACCTGCTGAAGCCGGCGCTCGCGCGCGGCGAGCTGCGCACGATCGCGGCGACCACGTGGAGCGAATACAA
GAAGTACTTCGAGAAGGATGCGGCGCTCGCGCGGCGCTTCCAGGTCGTGAAGATCGACGAGCCGAGCGAGCCGCTCGCCG
CCGCGATGCTGCGCGGGATGGCGGGGCTGATGGAGCAGCACTTCAACGTACGCATTCTCGACAATGCGATCACCGAGGCG
GTGCGGCTGTCGCATCGCTACATCAGCGGCCGCCAACTGCCCGACAAGGCGATCAGCGTGCTCGACACCGCGTGCGCGAA
GGTCGCGCTCGCGCACAGCGCGACGCCCGCCGCAATCGACGACGCGAAGAAGCGCATCGAGCGGATCGACGCGGAGATCG
CGGCGCTCGAGCGTGAAGCCGCGAGCGGCGCCGCGCATGACGAGCGCCTTGCCGAGCTGCGCGCCGAGCGCGAGGCCGAT
CTGAAGGCGCTGGCCGAAGACGAGGCGCGCTACGAAGAGGAGCGCGCGCTCGTGACCGAAATCGGCGCGCTGCGCGCCGA
GCTCGACGCCGCGCGCGAGCCGTCGGCCGACGGTCGGCCGGCCGACATCGACGCGACGCGCGCGAAGCTCGCCGAGCGCG
TCGATGCGTTGCGTGCGCTGCAGGGCAACCAGCCGATGGTGCCGCTGCAGGTCGATGGCCACGTCATTGCGGAAATCGTC
GCGTCGTGGACGGGCATTCCGCTCGGACGAATGGTGAAGGACGAGATCGAGACCGTGCTCAATCTGCGCGATCTGCTCGG
TGCGCGCGTGATCGGCCAGGACCACGCGCTCGACGCGATCGCGCAGCGCGTGCGCACCGCGACCGCGAACCTCGAGGACC
CGAACAAGCCGCGTGGCGTGTTCATGTTCGTCGGGCCGTCGGGCGTCGGCAAGACCGAGACCGCGCTTGCGCTTGCAGAC
GTGCTGTACGGCGGCGAACGCAAGATGATCACGATCAACATGAGCGAGTATCAGGAGGCGCACAGCGTGTCGGGCCTGAA
GGGCTCGCCGCCCGGTTACGTCGGCTACGGCGAGGGCGGCGTGCTGACGGAGGCGGTGCGCCGCAATCCGTACTCGGTCG
TGCTGCTCGACGAAGTCGAGAAGGCGCATCCGGATGTGCTCGAAATGTTCTTCCAGGTGTTTGACAAGGGCGCGATGGAC
GACGCCGAAGGCCGCGAGATCGACTTCCGCAATACGCTGATCATCCTGACGTCGAACGTCGGCTCGCCGGCGGTGATGCA
GGCGTGCCTGAACAAGACGCAGGAAGAGCTGCCCGATGCCGAGACGCTTGCCGAGACGCTGCGCCCGCAACTCTACAAGA
CCTTCAAGCCCGCGTTCCTCGGCCGCATGAAGGTGATTCCGTACTATCCGATCTCCGACGACGTGCTCGCCGAGATCATC
GAGCTGAAACTCGAACGGATTCGCCGCCGGATCGAAGCGAACCACAAGGCCGCGTTCGAATGGGACGAGTCGCTTGTCGA
CGCCGTGCTCGCGCGCTGCACCGAAGTCGATTCGGGCGCGCGCAACGTCGATCACATCCTGAACGGCACGCTGCTGCCCG
AGATCGCCGAGCACGTGCTGTCGCGGATCGCCGACGGCGAGGCGATCGCGCGGATCGCCGCGCGCGCGGCCGAGACGGGC
GAGTTCGAGTACACGGTCGAGTAA
ATGAGCACGCCCCTGAAGACCCTGATCGCGAAACTGAATCCGGTGTGCCGGAAGGCCGCCGAACGCGCCGCCAGCCATTG
CTTCGCACGCGGTCACTACGAAGTGGATCTCGAGCACTTGTTTCTCGCGCTGCTCGACGAATCGACCGGAGACGTGCCGC
TCGTGTTGCGCGCGAGCGGCGTCGATCCGCACGCGCTGCGCGCGGACCTCGAGCGCGAGCTTGAAGGCCTGAAGGCGGGC
AACACGCGTACGCCGGTGTTCTCGGTGCATCTGACCGAGCTGTTCGAGCAGGCGTGGCTCATCGCGTCGCTCGATTCGCA
GATCGGACGGATTCGCTCGGGCCACCTGCTGCTCGCGCTGCTGACGGGGCCGGATCTCGCGCAGTTCGCGCAGCGGATGT
CGCCGCAGTTCGCGCGCGTGAGAATCGATGACCTGAAGCACAAGTTCGACGAGATCACGGCGGGCTCGATCGAGACCGAG
CCGCGACAAGCGGAAGCCGACATCGCGGTGCCGGACGGCGCGGCGGCGGACTCGCCGCGCGGCCCGTCGAAGACGCCGGC
GCTCGACACGTATACGACGAACCTCACGCAGCGCGCGAGCGAAGGCAAGATCGATCCGGTGATCGGCCGCGACGCGGAGA
TTCGCCAGGCGATCGACATCCTGATGCGCCGCCGGCAGAACAATCCGATCATGACGGGTGAGGCGGGCGTCGGCAAGACG
GCCGTCGTCGAAGGGCTCGCGCTGAAGATCGCGGCCGACGACGTGCCGCCGCCGCTTTCCGGCGTCGCGTTGCACGTGCT
CGACATGGGTTTGCTGCAGGCGGGCGCAAGCGTGAAGGGCGAGTTCGAGAATCGCCTGAAGAGCGTGATCGACGAAGTGA
AGAAGAGCGCGCACCCGATCATCCTCTTCATCGACGAAGCGCACACGATCATCGGCGCGGGCGGGCAGGCCGGCCAGAAC
GACGCGGCTAACCTGCTGAAGCCGGCGCTCGCGCGCGGCGAGCTGCGCACGATCGCGGCGACCACGTGGAGCGAATACAA
GAAGTACTTCGAGAAGGATGCGGCGCTCGCGCGGCGCTTCCAGGTCGTGAAGATCGACGAGCCGAGCGAGCCGCTCGCCG
CCGCGATGCTGCGCGGGATGGCGGGGCTGATGGAGCAGCACTTCAACGTACGCATTCTCGACAATGCGATCACCGAGGCG
GTGCGGCTGTCGCATCGCTACATCAGCGGCCGCCAACTGCCCGACAAGGCGATCAGCGTGCTCGACACCGCGTGCGCGAA
GGTCGCGCTCGCGCACAGCGCGACGCCCGCCGCAATCGACGACGCGAAGAAGCGCATCGAGCGGATCGACGCGGAGATCG
CGGCGCTCGAGCGTGAAGCCGCGAGCGGCGCCGCGCATGACGAGCGCCTTGCCGAGCTGCGCGCCGAGCGCGAGGCCGAT
CTGAAGGCGCTGGCCGAAGACGAGGCGCGCTACGAAGAGGAGCGCGCGCTCGTGACCGAAATCGGCGCGCTGCGCGCCGA
GCTCGACGCCGCGCGCGAGCCGTCGGCCGACGGTCGGCCGGCCGACATCGACGCGACGCGCGCGAAGCTCGCCGAGCGCG
TCGATGCGTTGCGTGCGCTGCAGGGCAACCAGCCGATGGTGCCGCTGCAGGTCGATGGCCACGTCATTGCGGAAATCGTC
GCGTCGTGGACGGGCATTCCGCTCGGACGAATGGTGAAGGACGAGATCGAGACCGTGCTCAATCTGCGCGATCTGCTCGG
TGCGCGCGTGATCGGCCAGGACCACGCGCTCGACGCGATCGCGCAGCGCGTGCGCACCGCGACCGCGAACCTCGAGGACC
CGAACAAGCCGCGTGGCGTGTTCATGTTCGTCGGGCCGTCGGGCGTCGGCAAGACCGAGACCGCGCTTGCGCTTGCAGAC
GTGCTGTACGGCGGCGAACGCAAGATGATCACGATCAACATGAGCGAGTATCAGGAGGCGCACAGCGTGTCGGGCCTGAA
GGGCTCGCCGCCCGGTTACGTCGGCTACGGCGAGGGCGGCGTGCTGACGGAGGCGGTGCGCCGCAATCCGTACTCGGTCG
TGCTGCTCGACGAAGTCGAGAAGGCGCATCCGGATGTGCTCGAAATGTTCTTCCAGGTGTTTGACAAGGGCGCGATGGAC
GACGCCGAAGGCCGCGAGATCGACTTCCGCAATACGCTGATCATCCTGACGTCGAACGTCGGCTCGCCGGCGGTGATGCA
GGCGTGCCTGAACAAGACGCAGGAAGAGCTGCCCGATGCCGAGACGCTTGCCGAGACGCTGCGCCCGCAACTCTACAAGA
CCTTCAAGCCCGCGTTCCTCGGCCGCATGAAGGTGATTCCGTACTATCCGATCTCCGACGACGTGCTCGCCGAGATCATC
GAGCTGAAACTCGAACGGATTCGCCGCCGGATCGAAGCGAACCACAAGGCCGCGTTCGAATGGGACGAGTCGCTTGTCGA
CGCCGTGCTCGCGCGCTGCACCGAAGTCGATTCGGGCGCGCGCAACGTCGATCACATCCTGAACGGCACGCTGCTGCCCG
AGATCGCCGAGCACGTGCTGTCGCGGATCGCCGACGGCGAGGCGATCGCGCGGATCGCCGCGCGCGCGGCCGAGACGGGC
GAGTTCGAGTACACGGTCGAGTAA