Detailed information of component protein
Summary
External database links
Locus tag (Gene) | PLU_RS16120 |
Coordinate (Strand) | 3830821..3834207 (-) |
NCBI ID | WP_165828660.1 |
RefSeq | NC_005126 |
Uniprot ID | - |
KEGG ID | - |
PDB ID | - |
Pfam domain hit(s)
Domain | Pfam ID | E-value | Aligned region |
---|---|---|---|
IcmF-related | PF06761.14 | 8.3e-69 | 406..722 |
IcmF_C | PF06744.14 | 5.3e-21 | 982..1086 |
Transmembrane helices
- Transmembrane helices are predicted using TMHMM 2.0 software.
Prediction | Region | Sequence |
---|---|---|
Inside | 1-16 | MALQENKIPPISVVKT |
Transmembrane helix | 17-39 | LILLIGTITLLVSLAGLGWWVWG |
Outside | 40-53 | EHRTTDAETFNHLL |
Transmembrane helix | 54-76 | WVCGIAWVLTVVVSMLGFITVTL |
Inside | 77-357 | FVKNKVTDVKSDTRPLLPASEPYDYGDLGDRMRLRYGRFWWYKVRILLVVGEVEQVEAIAPGLTTTHWQEGYRTLLLWGGSLQAEPNTAQLMALRRLRRYRPLNAIVWALTENQSAQPVWMDKALRMLQKQAHQLRWQAPVYLWQVCHSTWSQEGRITQTVGCFFPERCTPDIVATQLQTLVDPLRERGMQQLLEKTAHDFLCRLSANLKQQGIAHWQQVLTPWLAEYGDVVSLRGLMFSLPLKAQTTRLPQIWLPDTAWQGVLEGSRCFHGRRVGMLHTQ |
Transmembrane helix | 358-380 | TVCRGLIVLGLLWGAGMMLSFFT |
Outside | 381-1128 | NRDQLAVVQAAVTDLKAQPENSDAQLMALKALRNEVDRLQDRAEHGVPWYERFGLSQNQKLLTAVVPDYAQVNNRLIRDKAAAVLHAKLSALVNLPPGSPLRAKRAKAGHDQLKAYLMMAQPEKVDAAFLTRILDENEPERAGIAPAVWLDTAWDLWSFYAENLAAHPEWRITPDKALIKQVRQLLLIQPGKHNAEAALYQQMLQSVEKNYSDLTLRQMTGDTDAARLFTTSHVIPGMFTRQAWEGGIQKAIAEAVASRKEAIDWVLSDNRQAVSASVSPEELKARLTARYFTDFAGAWQDFLNSLRWNKTRNLSDVIDQLTLMADGRQSPLIALMNTLAYQGETGQQGPSLSDSLVKSAKTLLNKKTPRMINQQTAGLHGPMDETFGPLLALMGENQAEGRIKADSTLNLQTFLTRVTDVRLKLQQMNNSDDPPAMANALAKTVFEGKSTDLTDTQGYGRLIAASLGGQWRGFGQTLFVEPLAQAWQGVLKPATANLNSQWQTAIVDNWDRAFAGRYPFAGGESEISLPMLGQFIRSDSGRIEQFLTRQLGGILHKAGNQWVVDEVNGQGVQINPDFLKAINQLSQLSDLLFADGSQGLRFELRARAVRDVVETDLTIDGQKLRYFNQMESWQSFRWPGETYKPGVMLTWTSVNAGARLFGDYQGNWGLIRWLAQAKAEKLDESRYRLIFTAPDGLPLTWILRTELGEGPLALLKLRGFKLPKNIFVVTPGNHTTISAVNDDDLIEE |
Signal peptides
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction | Probability | Cleavage site | Signal peptide sequence |
---|---|---|---|
Other | 0.9986 | - | - |
Protein sequence: 1129 a.a.
>T6CP000454 NC_005126:c3834207-3830821 [Photorhabdus laumondii subsp. laumondii TTO1] [TssM]
MALQENKIPPISVVKTLILLIGTITLLVSLAGLGWWVWGEHRTTDAETFNHLLWVCGIAWVLTVVVSMLGFITVTLFVKN
KVTDVKSDTRPLLPASEPYDYGDLGDRMRLRYGRFWWYKVRILLVVGEVEQVEAIAPGLTTTHWQEGYRTLLLWGGSLQA
EPNTAQLMALRRLRRYRPLNAIVWALTENQSAQPVWMDKALRMLQKQAHQLRWQAPVYLWQVCHSTWSQEGRITQTVGCF
FPERCTPDIVATQLQTLVDPLRERGMQQLLEKTAHDFLCRLSANLKQQGIAHWQQVLTPWLAEYGDVVSLRGLMFSLPLK
AQTTRLPQIWLPDTAWQGVLEGSRCFHGRRVGMLHTQTVCRGLIVLGLLWGAGMMLSFFTNRDQLAVVQAAVTDLKAQPE
NSDAQLMALKALRNEVDRLQDRAEHGVPWYERFGLSQNQKLLTAVVPDYAQVNNRLIRDKAAAVLHAKLSALVNLPPGSP
LRAKRAKAGHDQLKAYLMMAQPEKVDAAFLTRILDENEPERAGIAPAVWLDTAWDLWSFYAENLAAHPEWRITPDKALIK
QVRQLLLIQPGKHNAEAALYQQMLQSVEKNYSDLTLRQMTGDTDAARLFTTSHVIPGMFTRQAWEGGIQKAIAEAVASRK
EAIDWVLSDNRQAVSASVSPEELKARLTARYFTDFAGAWQDFLNSLRWNKTRNLSDVIDQLTLMADGRQSPLIALMNTLA
YQGETGQQGPSLSDSLVKSAKTLLNKKTPRMINQQTAGLHGPMDETFGPLLALMGENQAEGRIKADSTLNLQTFLTRVTD
VRLKLQQMNNSDDPPAMANALAKTVFEGKSTDLTDTQGYGRLIAASLGGQWRGFGQTLFVEPLAQAWQGVLKPATANLNS
QWQTAIVDNWDRAFAGRYPFAGGESEISLPMLGQFIRSDSGRIEQFLTRQLGGILHKAGNQWVVDEVNGQGVQINPDFLK
AINQLSQLSDLLFADGSQGLRFELRARAVRDVVETDLTIDGQKLRYFNQMESWQSFRWPGETYKPGVMLTWTSVNAGARL
FGDYQGNWGLIRWLAQAKAEKLDESRYRLIFTAPDGLPLTWILRTELGEGPLALLKLRGFKLPKNIFVVTPGNHTTISAV
NDDDLIEE*
MALQENKIPPISVVKTLILLIGTITLLVSLAGLGWWVWGEHRTTDAETFNHLLWVCGIAWVLTVVVSMLGFITVTLFVKN
KVTDVKSDTRPLLPASEPYDYGDLGDRMRLRYGRFWWYKVRILLVVGEVEQVEAIAPGLTTTHWQEGYRTLLLWGGSLQA
EPNTAQLMALRRLRRYRPLNAIVWALTENQSAQPVWMDKALRMLQKQAHQLRWQAPVYLWQVCHSTWSQEGRITQTVGCF
FPERCTPDIVATQLQTLVDPLRERGMQQLLEKTAHDFLCRLSANLKQQGIAHWQQVLTPWLAEYGDVVSLRGLMFSLPLK
AQTTRLPQIWLPDTAWQGVLEGSRCFHGRRVGMLHTQTVCRGLIVLGLLWGAGMMLSFFTNRDQLAVVQAAVTDLKAQPE
NSDAQLMALKALRNEVDRLQDRAEHGVPWYERFGLSQNQKLLTAVVPDYAQVNNRLIRDKAAAVLHAKLSALVNLPPGSP
LRAKRAKAGHDQLKAYLMMAQPEKVDAAFLTRILDENEPERAGIAPAVWLDTAWDLWSFYAENLAAHPEWRITPDKALIK
QVRQLLLIQPGKHNAEAALYQQMLQSVEKNYSDLTLRQMTGDTDAARLFTTSHVIPGMFTRQAWEGGIQKAIAEAVASRK
EAIDWVLSDNRQAVSASVSPEELKARLTARYFTDFAGAWQDFLNSLRWNKTRNLSDVIDQLTLMADGRQSPLIALMNTLA
YQGETGQQGPSLSDSLVKSAKTLLNKKTPRMINQQTAGLHGPMDETFGPLLALMGENQAEGRIKADSTLNLQTFLTRVTD
VRLKLQQMNNSDDPPAMANALAKTVFEGKSTDLTDTQGYGRLIAASLGGQWRGFGQTLFVEPLAQAWQGVLKPATANLNS
QWQTAIVDNWDRAFAGRYPFAGGESEISLPMLGQFIRSDSGRIEQFLTRQLGGILHKAGNQWVVDEVNGQGVQINPDFLK
AINQLSQLSDLLFADGSQGLRFELRARAVRDVVETDLTIDGQKLRYFNQMESWQSFRWPGETYKPGVMLTWTSVNAGARL
FGDYQGNWGLIRWLAQAKAEKLDESRYRLIFTAPDGLPLTWILRTELGEGPLALLKLRGFKLPKNIFVVTPGNHTTISAV
NDDDLIEE*
Nucleotide sequence: 3387 bp
>T6CP000454 NC_005126:c3834207-3830821 [Photorhabdus laumondii subsp. laumondii TTO1] [TssM]
ATGGCACTGCAAGAGAATAAAATACCGCCTATTTCGGTGGTGAAGACACTTATCTTACTGATAGGCACCATTACCCTGCT
GGTTTCGTTGGCTGGTCTGGGATGGTGGGTTTGGGGAGAACACCGAACCACTGATGCCGAAACTTTCAACCATCTGTTGT
GGGTTTGTGGAATAGCTTGGGTGCTCACTGTGGTGGTGAGTATGCTAGGTTTTATCACGGTAACGTTGTTTGTCAAAAAC
AAAGTCACCGATGTGAAGTCCGATACCCGGCCACTTTTGCCAGCCAGCGAACCGTATGATTATGGTGATTTGGGCGATCG
CATGCGCCTCCGTTACGGGCGGTTCTGGTGGTATAAAGTCCGCATTTTACTGGTGGTGGGCGAAGTGGAACAGGTGGAAG
CCATCGCGCCGGGGCTGACCACGACGCACTGGCAGGAGGGTTATCGCACGCTGTTGCTCTGGGGCGGCAGTTTGCAAGCG
GAACCGAATACCGCTCAATTGATGGCCCTGCGTCGCTTGCGCCGTTACCGCCCGCTCAATGCCATTGTCTGGGCGCTGAC
CGAAAACCAAAGTGCGCAGCCGGTGTGGATGGATAAAGCTTTGCGGATGTTACAAAAACAGGCCCACCAGTTGCGCTGGC
AGGCCCCGGTCTACCTGTGGCAGGTGTGTCACAGTACCTGGTCTCAGGAAGGTCGTATCACTCAGACCGTCGGCTGCTTT
TTTCCTGAACGCTGTACCCCGGATATCGTGGCGACACAGTTACAAACGTTGGTTGACCCGTTGCGCGAGCGCGGGATGCA
GCAACTGTTGGAGAAGACGGCCCACGATTTTCTTTGTCGTCTGTCCGCGAACTTGAAACAACAGGGGATTGCGCACTGGC
AACAGGTCCTGACGCCGTGGTTAGCGGAGTATGGTGATGTGGTGTCGCTGCGGGGTTTGATGTTCAGTTTGCCGCTTAAA
GCGCAGACGACTCGCCTCCCGCAGATCTGGCTGCCCGACACGGCATGGCAGGGGGTGTTGGAGGGCAGTCGTTGTTTCCA
CGGTCGGCGGGTGGGCATGCTCCACACACAGACCGTTTGTCGTGGCCTGATAGTGCTGGGCTTGTTATGGGGGGCCGGAA
TGATGCTCTCCTTTTTCACCAACCGTGACCAGCTAGCTGTGGTGCAGGCGGCGGTCACTGACCTGAAAGCTCAGCCGGAG
AATTCTGATGCCCAGTTGATGGCCTTAAAGGCGCTGCGTAACGAGGTGGACCGGCTGCAAGACCGGGCTGAACACGGTGT
ACCGTGGTATGAGCGCTTTGGTTTGAGTCAGAATCAGAAACTGTTGACGGCAGTGGTGCCCGATTATGCGCAGGTTAATA
ACCGCCTGATACGAGACAAAGCCGCTGCGGTGTTGCATGCGAAACTGAGTGCGCTGGTGAATTTACCGCCGGGCAGCCCT
TTGCGGGCTAAGCGGGCGAAAGCCGGTCATGACCAGTTGAAAGCCTACCTGATGATGGCGCAGCCGGAAAAAGTGGATGC
TGCGTTTTTAACCCGGATACTGGATGAAAATGAACCCGAGCGGGCCGGTATTGCCCCCGCTGTCTGGTTGGATACGGCGT
GGGATTTGTGGAGTTTTTATGCGGAGAATCTGGCCGCGCATCCCGAATGGCGGATAACCCCGGATAAGGCGTTGATTAAA
CAGGTGCGTCAGTTGTTGCTGATCCAGCCAGGTAAGCACAATGCCGAAGCGGCGCTTTACCAGCAGATGCTGCAATCAGT
GGAGAAAAATTATTCGGACCTGACGTTAAGGCAGATGACCGGCGACACCGATGCGGCGCGGCTGTTTACCACCTCTCACG
TGATACCGGGGATGTTTACCCGTCAGGCGTGGGAAGGCGGGATACAAAAGGCGATAGCGGAGGCGGTGGCGTCACGTAAA
GAGGCAATTGACTGGGTGCTGAGTGATAACCGTCAGGCAGTCTCGGCTTCGGTATCGCCCGAAGAGCTGAAAGCCCGTTT
GACCGCCCGTTACTTTACCGATTTTGCCGGGGCGTGGCAGGATTTTCTCAACAGCCTGCGCTGGAACAAAACCCGTAACC
TGTCGGATGTCATCGACCAGCTAACGTTGATGGCGGATGGGCGGCAGTCTCCGCTGATTGCGCTGATGAACACGCTGGCC
TATCAGGGCGAAACCGGGCAACAGGGGCCGAGTTTATCGGACTCATTGGTGAAATCCGCTAAAACGTTATTGAATAAAAA
AACGCCGCGAATGATTAATCAACAGACGGCTGGCTTGCACGGGCCGATGGATGAAACCTTTGGGCCGTTGTTGGCGCTGA
TGGGAGAAAATCAGGCAGAAGGAAGAATCAAGGCGGACAGTACCCTGAATTTACAAACCTTCCTGACGCGGGTAACCGAC
GTGCGTCTGAAACTGCAACAGATGAACAACAGCGACGACCCACCGGCAATGGCGAATGCGCTGGCTAAAACGGTATTTGA
AGGGAAAAGCACTGATTTGACCGATACGCAGGGCTATGGGCGCTTGATAGCCGCCAGTCTGGGCGGCCAATGGCGTGGTT
TTGGTCAGACGCTGTTTGTCGAGCCATTAGCGCAGGCGTGGCAGGGGGTATTGAAACCGGCGACGGCGAATCTGAATAGC
CAGTGGCAGACGGCGATAGTGGACAACTGGGATCGGGCATTTGCGGGTCGTTATCCGTTTGCCGGTGGCGAAAGTGAAAT
CTCATTGCCGATGTTGGGGCAGTTTATCCGGTCAGATTCAGGGCGGATAGAGCAGTTCTTGACGCGTCAGTTAGGCGGGA
TACTGCATAAAGCGGGTAACCAGTGGGTAGTGGATGAGGTGAATGGTCAGGGCGTACAGATTAACCCGGATTTTCTAAAG
GCGATAAATCAGCTCAGTCAGTTATCGGACCTGTTGTTTGCGGATGGCAGTCAGGGATTGCGGTTTGAACTGCGGGCCAG
AGCGGTGCGGGATGTGGTGGAAACTGACCTGACGATAGATGGGCAGAAACTGCGTTATTTTAACCAGATGGAAAGTTGGC
AAAGTTTTCGCTGGCCGGGAGAGACCTATAAACCGGGTGTGATGCTGACGTGGACCAGTGTCAATGCCGGGGCGAGATTG
TTTGGTGATTATCAGGGGAACTGGGGACTCATCCGCTGGCTGGCGCAGGCGAAAGCGGAGAAGCTGGATGAAAGCCGTTA
CCGACTGATATTTACCGCGCCGGATGGATTACCGTTAACCTGGATTTTGCGCACAGAATTGGGCGAAGGGCCGCTGGCGT
TATTAAAACTGCGCGGATTTAAATTGCCGAAAAATATCTTTGTAGTGACGCCGGGTAATCACACGACAATATCAGCGGTA
AATGACGATGATTTGATAGAGGAATAG
ATGGCACTGCAAGAGAATAAAATACCGCCTATTTCGGTGGTGAAGACACTTATCTTACTGATAGGCACCATTACCCTGCT
GGTTTCGTTGGCTGGTCTGGGATGGTGGGTTTGGGGAGAACACCGAACCACTGATGCCGAAACTTTCAACCATCTGTTGT
GGGTTTGTGGAATAGCTTGGGTGCTCACTGTGGTGGTGAGTATGCTAGGTTTTATCACGGTAACGTTGTTTGTCAAAAAC
AAAGTCACCGATGTGAAGTCCGATACCCGGCCACTTTTGCCAGCCAGCGAACCGTATGATTATGGTGATTTGGGCGATCG
CATGCGCCTCCGTTACGGGCGGTTCTGGTGGTATAAAGTCCGCATTTTACTGGTGGTGGGCGAAGTGGAACAGGTGGAAG
CCATCGCGCCGGGGCTGACCACGACGCACTGGCAGGAGGGTTATCGCACGCTGTTGCTCTGGGGCGGCAGTTTGCAAGCG
GAACCGAATACCGCTCAATTGATGGCCCTGCGTCGCTTGCGCCGTTACCGCCCGCTCAATGCCATTGTCTGGGCGCTGAC
CGAAAACCAAAGTGCGCAGCCGGTGTGGATGGATAAAGCTTTGCGGATGTTACAAAAACAGGCCCACCAGTTGCGCTGGC
AGGCCCCGGTCTACCTGTGGCAGGTGTGTCACAGTACCTGGTCTCAGGAAGGTCGTATCACTCAGACCGTCGGCTGCTTT
TTTCCTGAACGCTGTACCCCGGATATCGTGGCGACACAGTTACAAACGTTGGTTGACCCGTTGCGCGAGCGCGGGATGCA
GCAACTGTTGGAGAAGACGGCCCACGATTTTCTTTGTCGTCTGTCCGCGAACTTGAAACAACAGGGGATTGCGCACTGGC
AACAGGTCCTGACGCCGTGGTTAGCGGAGTATGGTGATGTGGTGTCGCTGCGGGGTTTGATGTTCAGTTTGCCGCTTAAA
GCGCAGACGACTCGCCTCCCGCAGATCTGGCTGCCCGACACGGCATGGCAGGGGGTGTTGGAGGGCAGTCGTTGTTTCCA
CGGTCGGCGGGTGGGCATGCTCCACACACAGACCGTTTGTCGTGGCCTGATAGTGCTGGGCTTGTTATGGGGGGCCGGAA
TGATGCTCTCCTTTTTCACCAACCGTGACCAGCTAGCTGTGGTGCAGGCGGCGGTCACTGACCTGAAAGCTCAGCCGGAG
AATTCTGATGCCCAGTTGATGGCCTTAAAGGCGCTGCGTAACGAGGTGGACCGGCTGCAAGACCGGGCTGAACACGGTGT
ACCGTGGTATGAGCGCTTTGGTTTGAGTCAGAATCAGAAACTGTTGACGGCAGTGGTGCCCGATTATGCGCAGGTTAATA
ACCGCCTGATACGAGACAAAGCCGCTGCGGTGTTGCATGCGAAACTGAGTGCGCTGGTGAATTTACCGCCGGGCAGCCCT
TTGCGGGCTAAGCGGGCGAAAGCCGGTCATGACCAGTTGAAAGCCTACCTGATGATGGCGCAGCCGGAAAAAGTGGATGC
TGCGTTTTTAACCCGGATACTGGATGAAAATGAACCCGAGCGGGCCGGTATTGCCCCCGCTGTCTGGTTGGATACGGCGT
GGGATTTGTGGAGTTTTTATGCGGAGAATCTGGCCGCGCATCCCGAATGGCGGATAACCCCGGATAAGGCGTTGATTAAA
CAGGTGCGTCAGTTGTTGCTGATCCAGCCAGGTAAGCACAATGCCGAAGCGGCGCTTTACCAGCAGATGCTGCAATCAGT
GGAGAAAAATTATTCGGACCTGACGTTAAGGCAGATGACCGGCGACACCGATGCGGCGCGGCTGTTTACCACCTCTCACG
TGATACCGGGGATGTTTACCCGTCAGGCGTGGGAAGGCGGGATACAAAAGGCGATAGCGGAGGCGGTGGCGTCACGTAAA
GAGGCAATTGACTGGGTGCTGAGTGATAACCGTCAGGCAGTCTCGGCTTCGGTATCGCCCGAAGAGCTGAAAGCCCGTTT
GACCGCCCGTTACTTTACCGATTTTGCCGGGGCGTGGCAGGATTTTCTCAACAGCCTGCGCTGGAACAAAACCCGTAACC
TGTCGGATGTCATCGACCAGCTAACGTTGATGGCGGATGGGCGGCAGTCTCCGCTGATTGCGCTGATGAACACGCTGGCC
TATCAGGGCGAAACCGGGCAACAGGGGCCGAGTTTATCGGACTCATTGGTGAAATCCGCTAAAACGTTATTGAATAAAAA
AACGCCGCGAATGATTAATCAACAGACGGCTGGCTTGCACGGGCCGATGGATGAAACCTTTGGGCCGTTGTTGGCGCTGA
TGGGAGAAAATCAGGCAGAAGGAAGAATCAAGGCGGACAGTACCCTGAATTTACAAACCTTCCTGACGCGGGTAACCGAC
GTGCGTCTGAAACTGCAACAGATGAACAACAGCGACGACCCACCGGCAATGGCGAATGCGCTGGCTAAAACGGTATTTGA
AGGGAAAAGCACTGATTTGACCGATACGCAGGGCTATGGGCGCTTGATAGCCGCCAGTCTGGGCGGCCAATGGCGTGGTT
TTGGTCAGACGCTGTTTGTCGAGCCATTAGCGCAGGCGTGGCAGGGGGTATTGAAACCGGCGACGGCGAATCTGAATAGC
CAGTGGCAGACGGCGATAGTGGACAACTGGGATCGGGCATTTGCGGGTCGTTATCCGTTTGCCGGTGGCGAAAGTGAAAT
CTCATTGCCGATGTTGGGGCAGTTTATCCGGTCAGATTCAGGGCGGATAGAGCAGTTCTTGACGCGTCAGTTAGGCGGGA
TACTGCATAAAGCGGGTAACCAGTGGGTAGTGGATGAGGTGAATGGTCAGGGCGTACAGATTAACCCGGATTTTCTAAAG
GCGATAAATCAGCTCAGTCAGTTATCGGACCTGTTGTTTGCGGATGGCAGTCAGGGATTGCGGTTTGAACTGCGGGCCAG
AGCGGTGCGGGATGTGGTGGAAACTGACCTGACGATAGATGGGCAGAAACTGCGTTATTTTAACCAGATGGAAAGTTGGC
AAAGTTTTCGCTGGCCGGGAGAGACCTATAAACCGGGTGTGATGCTGACGTGGACCAGTGTCAATGCCGGGGCGAGATTG
TTTGGTGATTATCAGGGGAACTGGGGACTCATCCGCTGGCTGGCGCAGGCGAAAGCGGAGAAGCTGGATGAAAGCCGTTA
CCGACTGATATTTACCGCGCCGGATGGATTACCGTTAACCTGGATTTTGCGCACAGAATTGGGCGAAGGGCCGCTGGCGT
TATTAAAACTGCGCGGATTTAAATTGCCGAAAAATATCTTTGTAGTGACGCCGGGTAATCACACGACAATATCAGCGGTA
AATGACGATGATTTGATAGAGGAATAG