Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | ABD410_RS01840 | Genome accession | NZ_CP155740 |
| Coordinates | 344856..345446 (+) | Length | 196 a.a. |
| NCBI ID | WP_002985850.1 | Uniprot ID | A0A9X8T4H8 |
| Organism | Streptococcus pyogenes strain 1851/03 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 339856..350446
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABD410_RS01825 (ABD410_01810) | - | 340669..342114 (-) | 1446 | WP_023612140.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase | - |
| ABD410_RS01830 (ABD410_01815) | - | 342202..343836 (+) | 1635 | WP_023612124.1 | polysaccharide biosynthesis protein | - |
| ABD410_RS01835 (ABD410_01820) | upp | 344004..344633 (+) | 630 | WP_023612134.1 | uracil phosphoribosyltransferase | - |
| ABD410_RS01840 (ABD410_01825) | clpP | 344856..345446 (+) | 591 | WP_002985850.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| ABD410_RS01845 (ABD410_01830) | - | 345938..346213 (+) | 276 | WP_002985847.1 | YlbG family protein | - |
| ABD410_RS01850 (ABD410_01835) | tmk | 346462..347097 (+) | 636 | WP_002990917.1 | dTMP kinase | - |
| ABD410_RS01855 (ABD410_01840) | - | 347115..347990 (+) | 876 | WP_002985844.1 | DNA polymerase III subunit delta' | - |
| ABD410_RS01860 (ABD410_01845) | - | 348115..348249 (+) | 135 | WP_014635307.1 | tpl protein | - |
| ABD410_RS01865 (ABD410_01850) | yabA | 348653..348976 (+) | 324 | WP_002985838.1 | DNA replication initiation control protein YabA | - |
| ABD410_RS01870 (ABD410_01855) | rsmI | 348981..349844 (+) | 864 | WP_021733048.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ABD410_RS01875 (ABD410_01860) | - | 349871..350263 (+) | 393 | WP_002985833.1 | DUF5684 domain-containing protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21648.88 Da Isoelectric Point: 5.2834
>NTDB_id=999191 ABD410_RS01840 WP_002985850.1 344856..345446(+) (clpP) [Streptococcus pyogenes strain 1851/03]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK
Nucleotide
Download Length: 591 bp
>NTDB_id=999191 ABD410_RS01840 WP_002985850.1 344856..345446(+) (clpP) [Streptococcus pyogenes strain 1851/03]
ATGATTCCTGTTGTTATTGAACAAACTAGTCGTGGAGAACGTTCTTATGACATTTATTCACGTTTATTGAAAGACCGTAT
TATCATGTTAACAGGGCCTGTCGAAGACAACATGGCCAACTCTGTCATAGCGCAGCTCTTATTCCTTGACGCGCAAGACA
ACACGAAAGATATCTACCTATATGTCAACACACCAGGTGGCTCTGTCTCAGCAGGCTTGGCTATTGTCGATACCATGAAC
TTTATCAAGGCCGATGTGCAAACTATTGTCATGGGTATGGCAGCTTCTATGGGGACAGTCATTGCTTCATCAGGAACAAA
AGGCAAACGCTTTATGTTACCAAATGCAGAGTATATGATCCACCAGCCAATGGGTGGCACAGGCGGTGGCACGCAACAAA
CGGATATGGCTATCGCAGCAGAACATCTCTTAAAAACACGTCACCGTTTAGAAAAAATCTTAGCGCAAAATGCTGGAAAA
ACGATTAAACAAATCCATAAAGATGCTGAGCGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAACAACGAACTAAAATAA
ATGATTCCTGTTGTTATTGAACAAACTAGTCGTGGAGAACGTTCTTATGACATTTATTCACGTTTATTGAAAGACCGTAT
TATCATGTTAACAGGGCCTGTCGAAGACAACATGGCCAACTCTGTCATAGCGCAGCTCTTATTCCTTGACGCGCAAGACA
ACACGAAAGATATCTACCTATATGTCAACACACCAGGTGGCTCTGTCTCAGCAGGCTTGGCTATTGTCGATACCATGAAC
TTTATCAAGGCCGATGTGCAAACTATTGTCATGGGTATGGCAGCTTCTATGGGGACAGTCATTGCTTCATCAGGAACAAA
AGGCAAACGCTTTATGTTACCAAATGCAGAGTATATGATCCACCAGCCAATGGGTGGCACAGGCGGTGGCACGCAACAAA
CGGATATGGCTATCGCAGCAGAACATCTCTTAAAAACACGTCACCGTTTAGAAAAAATCTTAGCGCAAAATGCTGGAAAA
ACGATTAAACAAATCCATAAAGATGCTGAGCGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAACAACGAACTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus pyogenes MGAS315 |
100 |
100 |
1 |
| clpP | Streptococcus pyogenes JRS4 |
100 |
100 |
1 |
| clpP | Streptococcus mutans UA159 |
90.816 |
100 |
0.908 |
| clpP | Streptococcus pneumoniae Rx1 |
90.769 |
99.49 |
0.903 |
| clpP | Streptococcus pneumoniae D39 |
90.769 |
99.49 |
0.903 |
| clpP | Streptococcus pneumoniae R6 |
90.769 |
99.49 |
0.903 |
| clpP | Streptococcus pneumoniae TIGR4 |
90.769 |
99.49 |
0.903 |
| clpP | Streptococcus thermophilus LMG 18311 |
89.796 |
100 |
0.898 |
| clpP | Streptococcus thermophilus LMD-9 |
89.796 |
100 |
0.898 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
86.224 |
100 |
0.862 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
85.714 |
100 |
0.857 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
57.143 |
100 |
0.571 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
56.995 |
98.469 |
0.561 |