Detailed information NTG0998972

Bioinformatically predicted

Overview

• Name: ciaR
• Type: Regulator
• Locus tag: ABD407_RS05240
• Genome accession: NZ_CP155736
• Coordinates: 1033911..1034585 (-)
• Length: 224 a.a.
• NCBI ID: WP_023612449.1
• Uniprot ID: A0A5S4THL0
• Organism: Streptococcus pyogenes strain 1966/14
• Function: repress competence development; post-transcriptional repression of CSP production (predicted from homology) Competence regulation

Genomic Context

Location: 1028911..1039585

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABD407_RS05215 (ABD407_05190)	-	1029358..1029747 (-)	390	WP_011285547.1	cytidine deaminase	-
ABD407_RS05220 (ABD407_05195)	-	1030400..1030993 (-)	594	WP_369303527.1	class I SAM-dependent methyltransferase	-
ABD407_RS05225 (ABD407_05200)	coaA	1031261..1032181 (+)	921	WP_010922353.1	type I pantothenate kinase	-
ABD407_RS05230 (ABD407_05205)	rpsT	1032235..1032483 (+)	249	WP_164977038.1	30S ribosomal protein S20	-
ABD407_RS05235 (ABD407_05210)	ciaH	1032608..1033918 (-)	1311	WP_011054528.1	cell wall metabolism sensor histidine kinase WalK	Regulator
ABD407_RS05240 (ABD407_05215)	ciaR	1033911..1034585 (-)	675	WP_023612449.1	response regulator transcription factor	Regulator
ABD407_RS05245 (ABD407_05220)	-	1034932..1037469 (-)	2538	WP_014407610.1	M1 family metallopeptidase	-
ABD407_RS05250 (ABD407_05225)	phoU	1037674..1038327 (-)	654	WP_002984514.1	phosphate signaling complex protein PhoU	-
ABD407_RS05255 (ABD407_05230)	pstB	1038395..1039153 (-)	759	WP_002993892.1	phosphate ABC transporter ATP-binding protein PstB	-

Sequence

Protein

• Length: 224 a.a.
• Molecular weight: 25704.85 Da
• Isoelectric Point: 4.5928

>NTDB_id=998972 ABD407_RS05240 WP_023612449.1 1033911..1034585(-) (ciaR) [Streptococcus pyogenes strain 1966/14]
MIKILLVEDDLSLSNSIFDFLDDFADVMQVFDGDEGLYEAESGIYDLILLDLMLPEKNGFQVLKELREKDIKIPVLIMTA
KEGLDDKGHGFELGADDYLTKPFYLEELKMRIQALLKRTGKFADKNISFGNLVVDLARKEVKVEGEVVELLGKEFDLLVY
LLQNQNVILPKTQIFDRLWGFDSDTTISVVEVYISKIRKKLKGTRFVNRLQTLRSVGYILKNNE

Nucleotide

• Length: 675 bp

>NTDB_id=998972 ABD407_RS05240 WP_023612449.1 1033911..1034585(-) (ciaR) [Streptococcus pyogenes strain 1966/14]
ATGATAAAAATATTATTAGTAGAAGATGACTTGAGCTTATCAAATTCCATTTTTGATTTTTTAGATGATTTTGCAGACGT
CATGCAAGTTTTTGATGGCGATGAAGGTTTATACGAAGCAGAAAGTGGTATTTATGATTTGATTTTGTTAGACCTTATGT
TGCCGGAGAAAAATGGCTTTCAAGTCTTAAAAGAATTGCGAGAAAAAGATATTAAAATTCCTGTGTTGATCATGACAGCT
AAAGAGGGTTTAGATGATAAAGGTCACGGATTTGAATTAGGTGCTGATGATTATCTGACAAAGCCGTTCTATTTAGAAGA
GTTAAAAATGCGAATTCAAGCACTGTTAAAAAGAACAGGGAAATTTGCAGATAAAAATATTAGTTTTGGCAATTTAGTGG
TCGACTTAGCTCGAAAAGAGGTGAAGGTTGAAGGGGAAGTAGTTGAATTACTTGGTAAAGAATTTGATTTGTTGGTGTAT
CTTTTGCAAAATCAAAACGTTATTTTACCAAAGACACAAATTTTTGATCGTTTATGGGGATTCGATAGTGATACTACGAT
TTCGGTTGTTGAAGTTTACATTTCTAAAATAAGGAAAAAATTAAAAGGTACCCGTTTTGTTAACAGGCTTCAAACTTTAA
GAAGCGTAGGGTATATTCTAAAAAACAATGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (4-112)

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (145-220)

3D structure

• AlphaFold DB: A0A5S4THL0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ciaR	Streptococcus pneumoniae Rx1	84.685	99.107	0.839
ciaR	Streptococcus pneumoniae D39	84.685	99.107	0.839
ciaR	Streptococcus pneumoniae R6	84.685	99.107	0.839
ciaR	Streptococcus pneumoniae TIGR4	84.685	99.107	0.839
ciaR	Streptococcus mutans UA159	84.685	99.107	0.839
covR	Lactococcus lactis subsp. lactis strain DGCC12653	38.667	100	0.388
micA	Streptococcus pneumoniae Cp1015	35.897	100	0.375
vicR	Streptococcus mutans UA159	35.897	100	0.375
covR	Streptococcus salivarius strain HSISS4	36.726	100	0.371