Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | ABDZ24_RS04855 | Genome accession | NZ_CP155623 |
| Coordinates | 895020..895601 (-) | Length | 193 a.a. |
| NCBI ID | WP_001049162.1 | Uniprot ID | A0A9W5QPC2 |
| Organism | Bacillus paramobilis strain N24509 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 890020..900601
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABDZ24_RS04830 (ABDZ24_04835) | - | 891016..891474 (+) | 459 | WP_001190080.1 | 8-oxo-dGTP diphosphatase | - |
| ABDZ24_RS04835 (ABDZ24_04840) | rapZ | 891495..892376 (+) | 882 | WP_000138462.1 | RNase adapter RapZ | - |
| ABDZ24_RS04840 (ABDZ24_04845) | - | 892380..893333 (+) | 954 | WP_000712183.1 | YvcK family protein | - |
| ABDZ24_RS04845 (ABDZ24_04850) | whiA | 893423..894373 (+) | 951 | WP_000006564.1 | DNA-binding protein WhiA | - |
| ABDZ24_RS04850 (ABDZ24_04855) | - | 894397..894645 (+) | 249 | WP_000250305.1 | HPr family phosphocarrier protein | - |
| ABDZ24_RS04855 (ABDZ24_04860) | clpP | 895020..895601 (-) | 582 | WP_001049162.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| ABDZ24_RS04860 (ABDZ24_04865) | - | 895843..896712 (-) | 870 | WP_097845439.1 | DUF421 domain-containing protein | - |
| ABDZ24_RS04865 (ABDZ24_04870) | - | 896733..896939 (-) | 207 | WP_000215904.1 | DUF1657 domain-containing protein | - |
| ABDZ24_RS04870 (ABDZ24_04875) | spoVAE | 896949..897299 (-) | 351 | WP_000575922.1 | stage V sporulation protein AE | - |
| ABDZ24_RS04875 (ABDZ24_04880) | spoVAD | 897296..898312 (-) | 1017 | WP_346817736.1 | stage V sporulation protein AD | - |
| ABDZ24_RS04880 (ABDZ24_04885) | spoVAC | 898313..898789 (-) | 477 | WP_000095399.1 | stage V sporulation protein AC | - |
| ABDZ24_RS04885 (ABDZ24_04890) | - | 898819..899304 (-) | 486 | WP_001228535.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| ABDZ24_RS04890 (ABDZ24_04895) | - | 899398..899604 (-) | 207 | WP_000216160.1 | DUF1657 domain-containing protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21419.67 Da Isoelectric Point: 5.0423
>NTDB_id=998119 ABDZ24_RS04855 WP_001049162.1 895020..895601(-) (clpP) [Bacillus paramobilis strain N24509]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=998119 ABDZ24_RS04855 WP_001049162.1 895020..895601(-) (clpP) [Bacillus paramobilis strain N24509]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCACAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGCGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGCATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACGGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCACAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGCGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGCATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACGGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
90.104 |
99.482 |
0.896 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.021 |
97.409 |
0.653 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
58.854 |
99.482 |
0.585 |
| clpP | Streptococcus pneumoniae D39 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae Rx1 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae R6 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.292 |
99.482 |
0.57 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pyogenes JRS4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus mutans UA159 |
55.44 |
100 |
0.554 |