Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilAI | Type | Machinery gene |
| Locus tag | ABFB11_RS17735 | Genome accession | NZ_CP155580 |
| Coordinates | 3835690..3836097 (-) | Length | 135 a.a. |
| NCBI ID | WP_049429914.1 | Uniprot ID | A0AA42QIU5 |
| Organism | Stenotrophomonas maltophilia isolate S62 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3830690..3841097
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABFB11_RS17725 (ABFB11_17725) | pilR | 3832250..3833623 (+) | 1374 | WP_005410795.1 | sigma-54 dependent transcriptional regulator | Regulator |
| ABFB11_RS17730 (ABFB11_17730) | pilB | 3833734..3835467 (-) | 1734 | WP_005414305.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| ABFB11_RS17735 (ABFB11_17735) | pilA/pilAI | 3835690..3836097 (-) | 408 | WP_049429914.1 | pilin | Machinery gene |
| ABFB11_RS17740 (ABFB11_17740) | - | 3836248..3836679 (-) | 432 | WP_049429913.1 | pilin | - |
| ABFB11_RS17745 (ABFB11_17745) | pilC | 3837033..3838292 (+) | 1260 | WP_049429912.1 | type II secretion system F family protein | Machinery gene |
| ABFB11_RS17750 (ABFB11_17750) | - | 3838300..3839163 (+) | 864 | WP_049429911.1 | A24 family peptidase | - |
| ABFB11_RS17755 (ABFB11_17755) | coaE | 3839175..3839786 (+) | 612 | WP_049429910.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 135 a.a. Molecular weight: 14285.50 Da Isoelectric Point: 6.2108
>NTDB_id=997939 ABFB11_RS17735 WP_049429914.1 3835690..3836097(-) (pilA/pilAI) [Stenotrophomonas maltophilia isolate S62]
MYTQKGFTLIELMIVVAIIAILAAIATVAFQPYVVRTQLAAALADITPGKTKVEILVNENRPASLVTADLIGGAQNAHCS
NVEAELSESGVGHISCTLKGHSVLDGKDLILRRSAEGIWSCDGSAFEARYRPTGC
MYTQKGFTLIELMIVVAIIAILAAIATVAFQPYVVRTQLAAALADITPGKTKVEILVNENRPASLVTADLIGGAQNAHCS
NVEAELSESGVGHISCTLKGHSVLDGKDLILRRSAEGIWSCDGSAFEARYRPTGC
Nucleotide
Download Length: 408 bp
>NTDB_id=997939 ABFB11_RS17735 WP_049429914.1 3835690..3836097(-) (pilA/pilAI) [Stenotrophomonas maltophilia isolate S62]
ATGTACACCCAGAAGGGTTTCACGCTCATCGAACTGATGATCGTGGTGGCCATCATCGCGATCCTTGCGGCGATTGCGAC
TGTGGCATTTCAGCCATACGTCGTGCGCACCCAGTTGGCGGCGGCGCTTGCGGATATCACGCCGGGAAAGACCAAGGTGG
AAATCCTCGTCAACGAGAACCGTCCGGCCAGTCTGGTGACAGCCGATCTTATCGGCGGTGCCCAGAACGCCCACTGCTCC
AACGTCGAGGCCGAGCTCAGTGAATCCGGTGTCGGCCATATCAGCTGCACCCTGAAGGGCCACAGCGTGCTGGACGGCAA
GGACCTGATCCTGCGCCGCTCCGCCGAGGGCATCTGGAGCTGCGATGGCAGCGCGTTCGAAGCGCGCTATCGCCCGACCG
GCTGCTGA
ATGTACACCCAGAAGGGTTTCACGCTCATCGAACTGATGATCGTGGTGGCCATCATCGCGATCCTTGCGGCGATTGCGAC
TGTGGCATTTCAGCCATACGTCGTGCGCACCCAGTTGGCGGCGGCGCTTGCGGATATCACGCCGGGAAAGACCAAGGTGG
AAATCCTCGTCAACGAGAACCGTCCGGCCAGTCTGGTGACAGCCGATCTTATCGGCGGTGCCCAGAACGCCCACTGCTCC
AACGTCGAGGCCGAGCTCAGTGAATCCGGTGTCGGCCATATCAGCTGCACCCTGAAGGGCCACAGCGTGCTGGACGGCAA
GGACCTGATCCTGCGCCGCTCCGCCGAGGGCATCTGGAGCTGCGATGGCAGCGCGTTCGAAGCGCGCTATCGCCCGACCG
GCTGCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
50.735 |
100 |
0.511 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.647 |
100 |
0.43 |
| pilA | Pseudomonas aeruginosa PAK |
37.584 |
100 |
0.415 |
| pilA | Acinetobacter baumannii strain A118 |
40.146 |
100 |
0.407 |
| comP | Acinetobacter baylyi ADP1 |
33.562 |
100 |
0.363 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
36.567 |
99.259 |
0.363 |