Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   ELZ51_RS07275 Genome accession   NZ_LR134094
Coordinates   1433118..1433780 (-) Length   220 a.a.
NCBI ID   WP_003051564.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1428118..1438780
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS07260 (NCTC4669_01546) sodA 1429071..1429676 (-) 606 WP_126426866.1 superoxide dismutase SodA -
  ELZ51_RS07265 (NCTC4669_01547) holA 1429766..1430812 (-) 1047 WP_126426868.1 DNA polymerase III subunit delta -
  ELZ51_RS07270 (NCTC4669_01548) comEC/celB 1430894..1433137 (-) 2244 WP_126426870.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ELZ51_RS07275 (NCTC4669_01549) comEA/celA/cilE 1433118..1433780 (-) 663 WP_003051564.1 helix-hairpin-helix domain-containing protein Machinery gene
  ELZ51_RS07280 (NCTC4669_01550) - 1434176..1434916 (-) 741 WP_164549225.1 lysophospholipid acyltransferase family protein -
  ELZ51_RS07285 (NCTC4669_01551) - 1435034..1435810 (+) 777 WP_126426874.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ELZ51_RS07290 (NCTC4669_01552) - 1435800..1436078 (+) 279 WP_115246202.1 GIY-YIG nuclease family protein -
  ELZ51_RS07295 (NCTC4669_01553) - 1436102..1438102 (-) 2001 WP_126426876.1 potassium transporter Kup -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 24162.57 Da        Isoelectric Point: 5.8872

>NTDB_id=997753 ELZ51_RS07275 WP_003051564.1 1433118..1433780(-) (comEA/celA/cilE) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MIDDLLTKGTNSLRKIYSLPRLIGVVLAIFLILTLSFVIWGKEQSQTKLPIVSTSSSIQQPASEEKKYPSEESNILVDLK
GAVQQEGVYKLRANSRVRDVIELAGGLTQEADRHAVNFAEKLVDEQVVYVAKQGEDISVLPNASSASKANAEMSNSTKVN
INKANLEELQRISGIGVKRAQDILETRDSLGGFKTLDDLRQVSGIGEKTLEKLKHELSLD

Nucleotide


Download         Length: 663 bp        

>NTDB_id=997753 ELZ51_RS07275 WP_003051564.1 1433118..1433780(-) (comEA/celA/cilE) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGATAGATGACTTGTTAACTAAAGGAACAAATAGCTTGAGAAAGATTTATTCTCTGCCACGCTTGATTGGTGTTGTGTT
AGCCATTTTTCTGATACTAACCCTAAGTTTTGTTATCTGGGGAAAAGAGCAGAGCCAAACAAAACTTCCTATTGTATCAA
CTTCTTCTTCCATACAACAGCCAGCTAGTGAGGAAAAAAAGTATCCTTCAGAAGAGAGTAATATTCTAGTGGATTTGAAA
GGAGCCGTACAACAGGAGGGAGTTTATAAGCTCAGGGCTAATAGCCGTGTGCGCGATGTCATTGAATTAGCTGGGGGACT
TACTCAGGAAGCTGATAGACATGCTGTTAATTTTGCAGAAAAACTGGTGGATGAGCAGGTTGTGTATGTGGCTAAGCAGG
GTGAAGACATTTCTGTCTTGCCAAATGCCTCCTCAGCAAGTAAAGCTAACGCAGAAATGTCTAACTCAACAAAGGTGAAT
ATCAATAAGGCAAATTTAGAGGAGTTACAACGTATTTCGGGCATTGGTGTAAAAAGAGCTCAGGATATTCTTGAGACGAG
AGACAGTCTAGGTGGCTTTAAAACGTTAGATGATCTTAGACAGGTATCTGGAATTGGTGAAAAAACACTTGAGAAATTGA
AACATGAACTATCGTTGGATTAA

Domains

Predicted by InterProScan.

SLBB domain (SLBB)

(77-129)

Helix-hairpin-helix motif (HHH_3)

(155-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae TIGR4

42.105

95

0.4

Multiple sequence alignment