Detailed information NTG0997546

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: ABC806_RS01075
• Genome accession: NZ_CP155539
• Coordinates: 211455..211859 (+)
• Length: 134 a.a.
• NCBI ID: WP_000588028.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae TIGR4
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 206455..216859

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC806_RS01050 (ABC806_01050)	-	207579..208637 (+)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-
ABC806_RS01055 (ABC806_01055)	-	208788..209153 (+)	366	WP_000286415.1	DUF1033 family protein	-
ABC806_RS01060 (ABC806_01060)	comGA/cglA/cilD	209229..210170 (+)	942	WP_000249564.1	competence type IV pilus ATPase ComGA	Machinery gene
ABC806_RS01065 (ABC806_01065)	comGB/cglB	210118..211134 (+)	1017	WP_074196785.1	competence type IV pilus assembly protein ComGB	Machinery gene
ABC806_RS01070 (ABC806_01070)	comGC/cglC	211136..211462 (+)	327	WP_000738627.1	comG operon protein ComGC	Machinery gene
ABC806_RS01075 (ABC806_01075)	comGD/cglD	211455..211859 (+)	405	WP_000588028.1	competence type IV pilus minor pilin ComGD	Machinery gene
ABC806_RS01080 (ABC806_01080)	comGE/cglE	211822..212124 (+)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
ABC806_RS01085 (ABC806_01085)	comGF/cglF	212087..212548 (+)	462	WP_000250534.1	competence type IV pilus minor pilin ComGF	Machinery gene
ABC806_RS01090 (ABC806_01090)	comGG/cglG	212526..212939 (+)	414	WP_000265622.1	competence type IV pilus minor pilin ComGG	Machinery gene
ABC806_RS01095 (ABC806_01095)	-	213076..213670 (+)	595	Protein_199	methyltransferase domain-containing protein	-
ABC806_RS01100 (ABC806_01100)	comYH	213731..214684 (+)	954	WP_000345135.1	class I SAM-dependent methyltransferase	Machinery gene
ABC806_RS01105 (ABC806_01105)	-	214735..215925 (+)	1191	WP_000167757.1	acetate kinase	-
ABC806_RS01110 (ABC806_01110)	-	215926..216057 (+)	132	WP_000768904.1	hypothetical protein	-
ABC806_RS01115 (ABC806_01115)	rnpA	216074..216445 (+)	372	WP_000739253.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14650.83 Da
• Isoelectric Point: 10.2164

>NTDB_id=997546 ABC806_RS01075 WP_000588028.1 211455..211859(+) (comGD/cglD) [Streptococcus pneumoniae TIGR4]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFSAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLPV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=997546 ABC806_RS01075 WP_000588028.1 211455..211859(+) (comGD/cglD) [Streptococcus pneumoniae TIGR4]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTCCAGTCCACTTTTTCAGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	100	100	1
comGD/cglD	Streptococcus pneumoniae Rx1	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae D39	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae R6	97.761	100	0.978
comGD/cglD	Streptococcus mitis NCTC 12261	96.241	99.254	0.955
comGD/cglD	Streptococcus mitis SK321	95.522	100	0.955
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	48.438	95.522	0.463
comYD	Streptococcus mutans UA159	48.438	95.522	0.463