Detailed information NTG0997548

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: ABC806_RS01085
• Genome accession: NZ_CP155539
• Coordinates: 212087..212548 (+)
• Length: 153 a.a.
• NCBI ID: WP_000250534.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae TIGR4
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 207087..217548

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC806_RS01050 (ABC806_01050)	-	207579..208637 (+)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-
ABC806_RS01055 (ABC806_01055)	-	208788..209153 (+)	366	WP_000286415.1	DUF1033 family protein	-
ABC806_RS01060 (ABC806_01060)	comGA/cglA/cilD	209229..210170 (+)	942	WP_000249564.1	competence type IV pilus ATPase ComGA	Machinery gene
ABC806_RS01065 (ABC806_01065)	comGB/cglB	210118..211134 (+)	1017	WP_074196785.1	competence type IV pilus assembly protein ComGB	Machinery gene
ABC806_RS01070 (ABC806_01070)	comGC/cglC	211136..211462 (+)	327	WP_000738627.1	comG operon protein ComGC	Machinery gene
ABC806_RS01075 (ABC806_01075)	comGD/cglD	211455..211859 (+)	405	WP_000588028.1	competence type IV pilus minor pilin ComGD	Machinery gene
ABC806_RS01080 (ABC806_01080)	comGE/cglE	211822..212124 (+)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
ABC806_RS01085 (ABC806_01085)	comGF/cglF	212087..212548 (+)	462	WP_000250534.1	competence type IV pilus minor pilin ComGF	Machinery gene
ABC806_RS01090 (ABC806_01090)	comGG/cglG	212526..212939 (+)	414	WP_000265622.1	competence type IV pilus minor pilin ComGG	Machinery gene
ABC806_RS01095 (ABC806_01095)	-	213076..213670 (+)	595	Protein_199	methyltransferase domain-containing protein	-
ABC806_RS01100 (ABC806_01100)	comYH	213731..214684 (+)	954	WP_000345135.1	class I SAM-dependent methyltransferase	Machinery gene
ABC806_RS01105 (ABC806_01105)	-	214735..215925 (+)	1191	WP_000167757.1	acetate kinase	-
ABC806_RS01110 (ABC806_01110)	-	215926..216057 (+)	132	WP_000768904.1	hypothetical protein	-
ABC806_RS01115 (ABC806_01115)	rnpA	216074..216445 (+)	372	WP_000739253.1	ribonuclease P protein component	-
ABC806_RS01120 (ABC806_01120)	-	216420..217244 (+)	825	WP_000727904.1	membrane protein insertase YidC	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17972.67 Da
• Isoelectric Point: 9.6092

>NTDB_id=997548 ABC806_RS01085 WP_000250534.1 212087..212548(+) (comGF/cglF) [Streptococcus pneumoniae TIGR4]
MVQNSCWQSKSHKVKAFTLLESLLALIVISGGLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEVELDRSQFEKVEGN
RLYMKQDGKDIAIGKSKSDDFRKTNARGRGYQPMVYGLKSVRITEDNQLVRFHFQFQKGLEREFIYRVEKEKS

Nucleotide

• Length: 462 bp

>NTDB_id=997548 ABC806_RS01085 WP_000250534.1 212087..212548(+) (comGF/cglF) [Streptococcus pneumoniae TIGR4]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGCTTGCCCTCAT
TGTCATCAGTGGGGGATTACTCCTTTTTCAAGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGACCAACTTGAGGTAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTATACATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGATGATTTCCGTAAAACGAATGCTCG
TGGTCGAGGTTATCAGCCTATGGTTTATGGACTCAAATCTGTACGGATTACAGAGGACAATCAACTGGTTCGCTTTCATT
TCCAGTTCCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	100	100	1
comGF/cglF	Streptococcus pneumoniae D39	100	100	1
comGF/cglF	Streptococcus pneumoniae R6	100	100	1
comGF/cglF	Streptococcus pneumoniae TIGR4	100	100	1
comGF/cglF	Streptococcus mitis SK321	90.85	100	0.909
comGF/cglF	Streptococcus mitis NCTC 12261	89.542	100	0.895