Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   ABC811_RS05570 Genome accession   NZ_CP155535
Coordinates   1083077..1083727 (-) Length   216 a.a.
NCBI ID   WP_000387352.1    Uniprot ID   A0A4J1SCX2
Organism   Streptococcus pneumoniae strain PJ755/1     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1078077..1088727
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC811_RS05550 (ABC811_05545) - 1078687..1079862 (-) 1176 WP_000655940.1 hypothetical protein -
  ABC811_RS05555 (ABC811_05550) - 1079866..1080453 (-) 588 WP_000933542.1 ABC transporter ATP-binding protein -
  ABC811_RS05560 (ABC811_05555) - 1080485..1080673 (-) 189 WP_010976492.1 hypothetical protein -
  ABC811_RS05565 (ABC811_05560) comEC/celB 1080853..1083093 (-) 2241 WP_000942422.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ABC811_RS05570 (ABC811_05565) comEA/celA/cilE 1083077..1083727 (-) 651 WP_000387352.1 helix-hairpin-helix domain-containing protein Machinery gene
  ABC811_RS05575 (ABC811_05570) - 1083795..1084364 (-) 570 WP_000443745.1 GNAT family N-acetyltransferase -
  ABC811_RS05580 (ABC811_05575) ald 1084541..1085652 (+) 1112 Protein_1103 alanine dehydrogenase -
  ABC811_RS05585 (ABC811_05580) - 1085953..1086279 (-) 327 Protein_1104 TfoX/Sxy family protein -
  ABC811_RS05590 (ABC811_05585) - 1086282..1086782 (-) 501 WP_000566988.1 GNAT family N-acetyltransferase -
  ABC811_RS05595 (ABC811_05590) - 1086962..1087930 (-) 969 WP_000658181.1 PhoH family protein -
  ABC811_RS05600 (ABC811_05595) - 1088016..1088231 (-) 216 WP_001232078.1 YozE family protein -

Sequence


Protein


Download         Length: 216 a.a.        Molecular weight: 23085.30 Da        Isoelectric Point: 6.0661

>NTDB_id=997322 ABC811_RS05570 WP_000387352.1 1083077..1083727(-) (comEA/celA/cilE) [Streptococcus pneumoniae strain PJ755/1]
MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTSVKETNLQAEVAAVSKDSSTGKEVNKEEKEEPVEQDLITVDVKG
AVKSPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQKVSDEALVYVPTKGEEAVSQQTGSGTASSTSKEKKVNLNKA
SLEELKQVKGLGGKRAQDIIDHREANGKFKSVDELKKVSGIGAKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=997322 ABC811_RS05570 WP_000387352.1 1083077..1083727(-) (comEA/celA/cilE) [Streptococcus pneumoniae strain PJ755/1]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATCGTCATCTGTACTGGTCTGGGCTTGCTTGTAGGAGGATT
TTTCCTGCTAAAGCCAGCTCCACAAACATCTGTCAAAGAGACGAATTTGCAGGCTGAAGTTGCAGCTGTTTCCAAGGACT
CATCGACCGGAAAGGAAGTGAACAAGGAAGAGAAGGAAGAACCAGTTGAACAAGATCTAATCACAGTAGATGTCAAAGGT
GCTGTCAAATCGCCAGGGATTTATGACTTGCCTGTAGGTAGTCGAGTCAATGATGCTGTTCAGAAGGCTGGTGGCTTGAC
AGAGCAAGCAGACAGCAAGTCGCTCAATCTAGCTCAGAAAGTTAGTGATGAGGCTCTGGTTTACGTTCCTACTAAGGGAG
AAGAAGCAGTTAGTCAACAGACTGGTTCGGGGACAGCTTCTTCAACAAGCAAGGAAAAGAAGGTCAATCTCAACAAGGCC
AGTCTGGAAGAACTCAAGCAGGTCAAGGGACTGGGAGGAAAACGAGCTCAGGACATTATTGACCATCGTGAGGCAAATGG
CAAGTTCAAGTCAGTAGACGAGCTCAAGAAGGTCTCTGGCATTGGTGCCAAGACCATAGAAAAACTTAAAGACTATGTTA
CAGTGGATTAA

Domains


Predicted by InterproScan.

(151-214)

(76-126)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4J1SCX2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae TIGR4

97.685

100

0.977

  comEA/celA/cilE Streptococcus pneumoniae Rx1

95.833

100

0.958

  comEA/celA/cilE Streptococcus pneumoniae D39

95.833

100

0.958

  comEA/celA/cilE Streptococcus pneumoniae R6

95.833

100

0.958

  comEA/celA/cilE Streptococcus mitis NCTC 12261

95.37

100

0.954

  comEA/celA/cilE Streptococcus mitis SK321

92.593

100

0.926

  comEA Lactococcus lactis subsp. cremoris KW2

44.053

100

0.463

  comEA Latilactobacillus sakei subsp. sakei 23K

34.335

100

0.37


Multiple sequence alignment