Detailed information NTG0996944

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: AAH687_RS07135
• Genome accession: NZ_CP155530
• Coordinates: 1435119..1435805 (+)
• Length: 228 a.a.
• NCBI ID: WP_026050153.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain TN5S8
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1430119..1440805

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAH687_RS07110 (AAH687_07110)	degS	1430282..1431457 (+)	1176	WP_003213166.1	sensor histidine kinase	Regulator
AAH687_RS07115 (AAH687_07115)	degU	1431522..1432211 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
AAH687_RS07120 (AAH687_07120)	-	1432423..1433265 (+)	843	WP_007499966.1	DegV family protein	-
AAH687_RS07125 (AAH687_07125)	comFA	1433691..1434764 (+)	1074	WP_346395552.1	helicase-related protein	Machinery gene
AAH687_RS07130 (AAH687_07130)	-	1434829..1435122 (+)	294	WP_008348267.1	competence protein ComFB	-
AAH687_RS07135 (AAH687_07135)	comFC	1435119..1435805 (+)	687	WP_026050153.1	amidophosphoribosyltransferase	Machinery gene
AAH687_RS07140 (AAH687_07140)	-	1435862..1436281 (+)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
AAH687_RS07145 (AAH687_07145)	flgM	1436361..1436624 (+)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
AAH687_RS07150 (AAH687_07150)	-	1436643..1437125 (+)	483	WP_008348261.1	flagellar protein FlgN	-
AAH687_RS07155 (AAH687_07155)	flgK	1437141..1438661 (+)	1521	WP_008348259.1	flagellar hook-associated protein FlgK	-
AAH687_RS07160 (AAH687_07160)	flgL	1438670..1439581 (+)	912	WP_108611024.1	flagellar hook-associated protein FlgL	-
AAH687_RS07165 (AAH687_07165)	-	1439628..1440206 (+)	579	WP_008348255.1	DUF6470 family protein	-
AAH687_RS07170 (AAH687_07170)	fliW	1440235..1440669 (+)	435	WP_025208061.1	flagellar assembly protein FliW	-

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26195.68 Da
• Isoelectric Point: 10.2584

>NTDB_id=996944 AAH687_RS07135 WP_026050153.1 1435119..1435805(+) (comFC) [Bacillus altitudinis strain TN5S8]
MICPICESHFVADFTWKSFLLLNEDRLCVACKNHLMKIQGPTCPKCGRAQSNDQLCQDCSRWNKRRDFAEILVMNRSVYA
YNNFMKDILARFKFRGDTALADLFKKDVQSAFKRSFSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVH
QRKQSKKRKNERLHQQNLFQLRQANPIVPNDIILIDDIYTTGATVYHAAKILKEAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=996944 AAH687_RS07135 WP_026050153.1 1435119..1435805(+) (comFC) [Bacillus altitudinis strain TN5S8]
TTGATTTGTCCAATTTGTGAGAGCCATTTTGTGGCTGATTTTACATGGAAATCATTCCTACTATTAAATGAAGATCGTTT
ATGTGTAGCATGTAAGAACCACCTGATGAAGATTCAAGGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATCAAATGATC
AATTGTGTCAAGATTGTTCAAGGTGGAATAAACGACGGGATTTTGCTGAGATTCTTGTAATGAATCGGTCTGTTTATGCT
TACAACAACTTTATGAAAGATATTCTAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGA
TGTACAGTCAGCGTTTAAACGTTCTTTTTCAATCAAAGAACCGGTGCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAA
AGGAAAGAGGATTCAATCAGTCAATGATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACAT
CAAAGGAAGCAGTCTAAGAAAAGAAAAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGGCAAACCCGAT
CGTTCCAAACGATATCATATTAATCGATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAG
AAGCAGGCGCCAAAAGTGTTTCCTCTTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50	100	0.504
comFC/cflB	Streptococcus mitis SK321	39.301	100	0.395
comFC/cflB	Streptococcus mitis NCTC 12261	38.428	100	0.386
comFC/cflB	Streptococcus pneumoniae TIGR4	37.555	100	0.377
comFC/cflB	Streptococcus pneumoniae Rx1	37.555	100	0.377
comFC/cflB	Streptococcus pneumoniae D39	37.555	100	0.377
comFC/cflB	Streptococcus pneumoniae R6	37.555	100	0.377