Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ABDE90_RS01565 | Genome accession | NZ_CP155458 |
| Coordinates | 334352..334813 (+) | Length | 153 a.a. |
| NCBI ID | WP_000993718.1 | Uniprot ID | A0A9P2XM63 |
| Organism | Acinetobacter baumannii strain 2024CK-00329 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 329352..339813
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABDE90_RS01545 (ABDE90_01540) | - | 330743..331630 (+) | 888 | WP_001017330.1 | metal-dependent hydrolase | - |
| ABDE90_RS01550 (ABDE90_01545) | - | 331761..332351 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| ABDE90_RS01555 (ABDE90_01550) | - | 332373..333455 (+) | 1083 | WP_001246381.1 | YgcG family protein | - |
| ABDE90_RS01560 (ABDE90_01555) | - | 333449..334009 (+) | 561 | WP_000258949.1 | TPM domain-containing protein | - |
| ABDE90_RS01565 (ABDE90_01560) | pilA | 334352..334813 (+) | 462 | WP_000993718.1 | pilin | Machinery gene |
| ABDE90_RS01570 (ABDE90_01565) | - | 335055..336683 (+) | 1629 | WP_001195771.1 | PglL family O-oligosaccharyltransferase | - |
| ABDE90_RS01575 (ABDE90_01570) | bfr | 336724..337188 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
| ABDE90_RS01580 (ABDE90_01575) | - | 337433..337627 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| ABDE90_RS01585 (ABDE90_01580) | - | 337837..338220 (-) | 384 | WP_000090000.1 | RidA family protein | - |
Sequence
Protein
Download Length: 153 a.a. Molecular weight: 15449.52 Da Isoelectric Point: 4.9218
>NTDB_id=996454 ABDE90_RS01565 WP_000993718.1 334352..334813(+) (pilA) [Acinetobacter baumannii strain 2024CK-00329]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYVARSQATAGYSEISNMRTGYDTELNDGTAITSLSQVGFTATSSGACS
AIGVTNFGNDGAATNAITCTLKGNPKIAGKIISLSRSATGAWTCSTDIATTDEFLPKGCTGGGTPAVGAITTL
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYVARSQATAGYSEISNMRTGYDTELNDGTAITSLSQVGFTATSSGACS
AIGVTNFGNDGAATNAITCTLKGNPKIAGKIISLSRSATGAWTCSTDIATTDEFLPKGCTGGGTPAVGAITTL
Nucleotide
Download Length: 462 bp
>NTDB_id=996454 ABDE90_RS01565 WP_000993718.1 334352..334813(+) (pilA) [Acinetobacter baumannii strain 2024CK-00329]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCTGCGATTGCGAT
TCCTGCTTATCAAAATTATGTAGCTCGTTCTCAGGCTACAGCTGGATATTCTGAAATTAGTAACATGCGTACGGGTTACG
ACACCGAATTAAATGATGGTACAGCGATTACCTCTCTTTCTCAAGTTGGCTTTACTGCGACTTCATCTGGCGCATGTTCA
GCCATAGGTGTTACAAATTTTGGTAACGATGGCGCAGCTACTAACGCTATTACGTGTACTTTAAAAGGAAATCCAAAAAT
CGCTGGAAAGATTATTTCACTTTCACGTTCAGCGACCGGTGCATGGACTTGTAGTACAGATATTGCCACTACTGACGAAT
TCTTACCAAAAGGATGTACGGGTGGTGGAACACCAGCCGTTGGTGCAATTACTACTTTGTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCTGCGATTGCGAT
TCCTGCTTATCAAAATTATGTAGCTCGTTCTCAGGCTACAGCTGGATATTCTGAAATTAGTAACATGCGTACGGGTTACG
ACACCGAATTAAATGATGGTACAGCGATTACCTCTCTTTCTCAAGTTGGCTTTACTGCGACTTCATCTGGCGCATGTTCA
GCCATAGGTGTTACAAATTTTGGTAACGATGGCGCAGCTACTAACGCTATTACGTGTACTTTAAAAGGAAATCCAAAAAT
CGCTGGAAAGATTATTTCACTTTCACGTTCAGCGACCGGTGCATGGACTTGTAGTACAGATATTGCCACTACTGACGAAT
TCTTACCAAAAGGATGTACGGGTGGTGGAACACCAGCCGTTGGTGCAATTACTACTTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
64.286 |
100 |
0.647 |
| pilA | Pseudomonas aeruginosa PAK |
43.709 |
98.693 |
0.431 |
| pilA | Vibrio cholerae strain A1552 |
42.581 |
100 |
0.431 |
| pilA | Vibrio cholerae C6706 |
42.581 |
100 |
0.431 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
42.581 |
100 |
0.431 |
| comP | Acinetobacter baylyi ADP1 |
39.744 |
100 |
0.405 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
43.357 |
93.464 |
0.405 |