Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | AAVB50_RS00480 | Genome accession | NZ_CP154923 |
| Coordinates | 56077..56367 (+) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain FUA2233 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 51077..61367
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAVB50_RS00465 (AAVB50_00465) | yabE | 51273..52586 (-) | 1314 | WP_015715099.1 | ubiquitin-like domain-containing protein | - |
| AAVB50_RS00470 (AAVB50_00470) | dayD | 52742..53509 (-) | 768 | WP_345805713.1 | TatD family hydrolase | - |
| AAVB50_RS00475 (AAVB50_00475) | metG | 53588..55582 (-) | 1995 | WP_345805714.1 | methionine--tRNA ligase | - |
| AAVB50_RS00480 (AAVB50_00480) | abrB | 56077..56367 (+) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| AAVB50_RS00485 (AAVB50_00485) | rsmI | 56416..57294 (-) | 879 | WP_345805715.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| AAVB50_RS00490 (AAVB50_00490) | yazA | 57269..57568 (-) | 300 | WP_014475567.1 | GIY-YIG nuclease family protein | - |
| AAVB50_RS00495 (AAVB50_00495) | trmNF | 57555..58298 (-) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| AAVB50_RS00500 (AAVB50_00500) | yabA | 58357..58716 (-) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| AAVB50_RS00505 (AAVB50_00505) | ricT | 58731..59558 (-) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| AAVB50_RS00510 (AAVB50_00510) | holB | 59561..60550 (-) | 990 | WP_003244417.1 | DNA polymerase III subunit delta' | - |
| AAVB50_RS00515 (AAVB50_00515) | yaaR | 60562..61002 (-) | 441 | WP_339175635.1 | YaaR family protein | - |
| AAVB50_RS00520 (AAVB50_00520) | darA | 61015..61344 (-) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=995499 AAVB50_RS00480 WP_003226760.1 56077..56367(+) (abrB) [Bacillus subtilis strain FUA2233]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=995499 AAVB50_RS00480 WP_003226760.1 56077..56367(+) (abrB) [Bacillus subtilis strain FUA2233]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |