Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | AAVC46_RS11245 | Genome accession | NZ_CP154913 |
| Coordinates | 2137485..2138081 (+) | Length | 198 a.a. |
| NCBI ID | WP_034660066.1 | Uniprot ID | - |
| Organism | Bacillus pumilus strain FUA2119 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2132485..2143081
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAVC46_RS11225 (AAVC46_11225) | nikA | 2132803..2134434 (-) | 1632 | WP_340973855.1 | nickel ABC transporter substrate-binding protein | - |
| AAVC46_RS11230 (AAVC46_11230) | - | 2134556..2135725 (-) | 1170 | WP_345820239.1 | macrolide family glycosyltransferase | - |
| AAVC46_RS11235 (AAVC46_11235) | - | 2135894..2136784 (-) | 891 | WP_340974406.1 | ABC transporter substrate-binding protein | - |
| AAVC46_RS11245 (AAVC46_11245) | clpP | 2137485..2138081 (+) | 597 | WP_034660066.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| AAVC46_RS11250 (AAVC46_11250) | - | 2138141..2138719 (-) | 579 | WP_034660067.1 | TIGR00730 family Rossman fold protein | - |
| AAVC46_RS11255 (AAVC46_11255) | - | 2138856..2139197 (+) | 342 | WP_034660068.1 | MazG-like family protein | - |
| AAVC46_RS11260 (AAVC46_11260) | - | 2139226..2140848 (-) | 1623 | WP_307500290.1 | SulP family inorganic anion transporter | - |
| AAVC46_RS11265 (AAVC46_11265) | - | 2140886..2141467 (-) | 582 | WP_117731853.1 | carbonic anhydrase | - |
| AAVC46_RS11270 (AAVC46_11270) | - | 2142020..2142997 (+) | 978 | WP_307500291.1 | D-glycerate dehydrogenase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21832.99 Da Isoelectric Point: 4.6141
>NTDB_id=995323 AAVC46_RS11245 WP_034660066.1 2137485..2138081(+) (clpP) [Bacillus pumilus strain FUA2119]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALEYGLIDKVLTRNSEEQK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALEYGLIDKVLTRNSEEQK
Nucleotide
Download Length: 597 bp
>NTDB_id=995323 AAVC46_RS11245 WP_034660066.1 2137485..2138081(+) (clpP) [Bacillus pumilus strain FUA2119]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTGTCACAGCTGCTTTTCTTAGAAGCTG
AAGATCCAGAGAAAGATATCTCTATCTACATTAACAGCCCTGGCGGTTCGATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACCATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCCCTTCCAAACAGTGAAGTCATGATTCACCAACCACTAGGTGGTGCCCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTGATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTGAATACGGACTTATTGA
CAAAGTCTTGACCCGTAATTCAGAAGAACAAAAATAA
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTGTCACAGCTGCTTTTCTTAGAAGCTG
AAGATCCAGAGAAAGATATCTCTATCTACATTAACAGCCCTGGCGGTTCGATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACCATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCCCTTCCAAACAGTGAAGTCATGATTCACCAACCACTAGGTGGTGCCCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTGATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTGAATACGGACTTATTGA
CAAAGTCTTGACCCGTAATTCAGAAGAACAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
92.893 |
99.495 |
0.924 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.063 |
96.465 |
0.657 |
| clpP | Streptococcus thermophilus LMG 18311 |
59.067 |
97.475 |
0.576 |
| clpP | Streptococcus thermophilus LMD-9 |
59.067 |
97.475 |
0.576 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
57.216 |
97.98 |
0.561 |
| clpP | Streptococcus pneumoniae D39 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pneumoniae Rx1 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pneumoniae R6 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pneumoniae TIGR4 |
56.701 |
97.98 |
0.556 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
55.155 |
97.98 |
0.54 |
| clpP | Streptococcus pyogenes JRS4 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus pyogenes MGAS315 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus mutans UA159 |
54.639 |
97.98 |
0.535 |