Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | AAYR28_RS15870 | Genome accession | NZ_CP154909 |
| Coordinates | 3073346..3073942 (+) | Length | 198 a.a. |
| NCBI ID | WP_024427684.1 | Uniprot ID | - |
| Organism | Bacillus safensis strain FUA2117 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3068346..3078942
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAYR28_RS15835 (AAYR28_15835) | - | 3068663..3070345 (-) | 1683 | WP_120207745.1 | DUF2326 domain-containing protein | - |
| AAYR28_RS15840 (AAYR28_15840) | - | 3070565..3071122 (-) | 558 | WP_120207749.1 | hypothetical protein | - |
| AAYR28_RS15845 (AAYR28_15845) | - | 3071122..3071358 (-) | 237 | WP_120207751.1 | hypothetical protein | - |
| AAYR28_RS15850 (AAYR28_15850) | - | 3071493..3071678 (-) | 186 | WP_183002023.1 | hypothetical protein | - |
| AAYR28_RS15855 (AAYR28_15855) | - | 3071833..3072225 (-) | 393 | WP_214755370.1 | helix-turn-helix transcriptional regulator | - |
| AAYR28_RS15860 (AAYR28_15860) | - | 3072256..3072702 (-) | 447 | WP_345808882.1 | hypothetical protein | - |
| AAYR28_RS15870 (AAYR28_15870) | clpP | 3073346..3073942 (+) | 597 | WP_024427684.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| AAYR28_RS15875 (AAYR28_15875) | - | 3074000..3074578 (-) | 579 | WP_041107909.1 | TIGR00730 family Rossman fold protein | - |
| AAYR28_RS15880 (AAYR28_15880) | - | 3074716..3075057 (+) | 342 | WP_034281021.1 | MazG-like family protein | - |
| AAYR28_RS15885 (AAYR28_15885) | - | 3075085..3076707 (-) | 1623 | WP_024423544.1 | SulP family inorganic anion transporter | - |
| AAYR28_RS15890 (AAYR28_15890) | - | 3076745..3077326 (-) | 582 | WP_120208040.1 | carbonic anhydrase | - |
| AAYR28_RS15895 (AAYR28_15895) | - | 3077880..3078857 (+) | 978 | WP_224426650.1 | D-glycerate dehydrogenase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21832.00 Da Isoelectric Point: 4.6835
>NTDB_id=995208 AAYR28_RS15870 WP_024427684.1 3073346..3073942(+) (clpP) [Bacillus safensis strain FUA2117]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNTEDQK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNTEDQK
Nucleotide
Download Length: 597 bp
>NTDB_id=995208 AAYR28_RS15870 WP_024427684.1 3073346..3073942(+) (clpP) [Bacillus safensis strain FUA2117]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTGTCACAGCTGCTTTTCTTAGAAGCTG
AAGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGCGGTTCAATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCTCTTCCAAACAGTGAAGTCATGATTCACCAACCACTAGGCGGTGCCCAAGGTCAAGCAA
CTGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATACAGAAGACCAAAAATAA
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTGTCACAGCTGCTTTTCTTAGAAGCTG
AAGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGCGGTTCAATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCTCTTCCAAACAGTGAAGTCATGATTCACCAACCACTAGGCGGTGCCCAAGGTCAAGCAA
CTGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATACAGAAGACCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
93.939 |
100 |
0.939 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.539 |
96.465 |
0.652 |
| clpP | Streptococcus thermophilus LMG 18311 |
58.549 |
97.475 |
0.571 |
| clpP | Streptococcus thermophilus LMD-9 |
58.549 |
97.475 |
0.571 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
56.186 |
97.98 |
0.551 |
| clpP | Streptococcus pneumoniae Rx1 |
55.67 |
97.98 |
0.545 |
| clpP | Streptococcus pneumoniae D39 |
55.67 |
97.98 |
0.545 |
| clpP | Streptococcus pneumoniae R6 |
55.67 |
97.98 |
0.545 |
| clpP | Streptococcus pneumoniae TIGR4 |
55.67 |
97.98 |
0.545 |
| clpP | Streptococcus pyogenes JRS4 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus pyogenes MGAS315 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus mutans UA159 |
54.639 |
97.98 |
0.535 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
54.124 |
97.98 |
0.53 |