Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | AAVD18_RS13290 | Genome accession | NZ_CP154893 |
| Coordinates | 2519972..2520568 (+) | Length | 198 a.a. |
| NCBI ID | WP_003151513.1 | Uniprot ID | I2CAH7 |
| Organism | Bacillus amyloliquefaciens strain Fad 11/2 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
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Genomic Context
Location: 2514972..2525568
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAVD18_RS13265 (AAVD18_13265) | - | 2515005..2515316 (+) | 312 | WP_013353708.1 | hypothetical protein | - |
| AAVD18_RS13275 (AAVD18_13275) | - | 2515627..2517096 (-) | 1470 | WP_013353709.1 | glycoside hydrolase family 32 protein | - |
| AAVD18_RS13280 (AAVD18_13280) | - | 2517111..2518343 (-) | 1233 | WP_013353710.1 | MFS transporter | - |
| AAVD18_RS13285 (AAVD18_13285) | - | 2518719..2519693 (+) | 975 | WP_013353711.1 | LacI family DNA-binding transcriptional regulator | - |
| AAVD18_RS13290 (AAVD18_13290) | clpP | 2519972..2520568 (+) | 597 | WP_003151513.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| AAVD18_RS13295 (AAVD18_13295) | - | 2520611..2521471 (-) | 861 | WP_013353712.1 | LysR family transcriptional regulator | - |
| AAVD18_RS13300 (AAVD18_13300) | - | 2521643..2522773 (+) | 1131 | WP_013353713.1 | PrpF domain-containing protein | - |
| AAVD18_RS13305 (AAVD18_13305) | - | 2522817..2524193 (+) | 1377 | WP_013353714.1 | MFS transporter | - |
| AAVD18_RS13310 (AAVD18_13310) | - | 2524376..2525215 (+) | 840 | WP_014471069.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21831.06 Da Isoelectric Point: 4.6982
>NTDB_id=994717 AAVD18_RS13290 WP_003151513.1 2519972..2520568(+) (clpP) [Bacillus amyloliquefaciens strain Fad 11/2]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSADEALEYGLIDKVLTRNTEDQK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSADEALEYGLIDKVLTRNTEDQK
Nucleotide
Download Length: 597 bp
>NTDB_id=994717 AAVD18_RS13290 WP_003151513.1 2519972..2520568(+) (clpP) [Bacillus amyloliquefaciens strain Fad 11/2]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGAGAAAGAGCTTATGACATTTACTCCCGTCTTTTGAAGGA
CCGTATTATCATGCTTGGATCTGCGATTGATGACAACGTTGCAAACTCCATCGTGTCACAGCTTTTATTCCTTGAAGCGG
AAGACCCTGAAAAAGATATTTCCATTTACATTAACAGCCCTGGCGGATCAATCACTGCCGGTATGGCAATCTATGATACA
ATGCAGTTCATTAAACCGAAAGTATCCACGATCTGCATCGGTATGGCCGCTTCTATGGGAGCATTCTTACTTGCTGCCGG
AGAAAAAGGCAAACGTTACGCGCTTCCTAACAGTGAAGTCATGATTCACCAGCCGCTTGGCGGAGCGCAAGGACAGGCGA
CTGAAATTGAAATCGCTGCTAAACGCATTCTCTTGCTTCGCGATAAATTAAACAAAGTGCTTGCTGAACGTACCGGCCAG
CCGCTTGAAGTGATCGAGCGCGACACGGACCGCGACAACTTCAAATCAGCTGATGAAGCTTTAGAATACGGCTTAATCGA
TAAAGTGCTGACACGCAATACGGAAGACCAGAAGTAA
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGAGAAAGAGCTTATGACATTTACTCCCGTCTTTTGAAGGA
CCGTATTATCATGCTTGGATCTGCGATTGATGACAACGTTGCAAACTCCATCGTGTCACAGCTTTTATTCCTTGAAGCGG
AAGACCCTGAAAAAGATATTTCCATTTACATTAACAGCCCTGGCGGATCAATCACTGCCGGTATGGCAATCTATGATACA
ATGCAGTTCATTAAACCGAAAGTATCCACGATCTGCATCGGTATGGCCGCTTCTATGGGAGCATTCTTACTTGCTGCCGG
AGAAAAAGGCAAACGTTACGCGCTTCCTAACAGTGAAGTCATGATTCACCAGCCGCTTGGCGGAGCGCAAGGACAGGCGA
CTGAAATTGAAATCGCTGCTAAACGCATTCTCTTGCTTCGCGATAAATTAAACAAAGTGCTTGCTGAACGTACCGGCCAG
CCGCTTGAAGTGATCGAGCGCGACACGGACCGCGACAACTTCAAATCAGCTGATGAAGCTTTAGAATACGGCTTAATCGA
TAAAGTGCTGACACGCAATACGGAAGACCAGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
95.96 |
100 |
0.96 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.586 |
96.465 |
0.662 |
| clpP | Streptococcus thermophilus LMG 18311 |
58.549 |
97.475 |
0.571 |
| clpP | Streptococcus thermophilus LMD-9 |
58.549 |
97.475 |
0.571 |
| clpP | Streptococcus pneumoniae D39 |
57.216 |
97.98 |
0.561 |
| clpP | Streptococcus pneumoniae Rx1 |
57.216 |
97.98 |
0.561 |
| clpP | Streptococcus pneumoniae R6 |
57.216 |
97.98 |
0.561 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.216 |
97.98 |
0.561 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pyogenes JRS4 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus pyogenes MGAS315 |
55.44 |
97.475 |
0.54 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
54.639 |
97.98 |
0.535 |
| clpP | Streptococcus mutans UA159 |
54.639 |
97.98 |
0.535 |