Detailed information NTG0994405

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: AAYT22_RS09290
• Genome accession: NZ_CP154876
• Coordinates: 1793035..1793439 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588023.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 20155336
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1788035..1798439

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYT22_RS09250 (AAYT22_09240)	rnpA	1788449..1788820 (-)	372	WP_000739246.1	ribonuclease P protein component	-
AAYT22_RS09255 (AAYT22_09245)	-	1788837..1788968 (-)	132	WP_000768904.1	hypothetical protein	-
AAYT22_RS09260 (AAYT22_09250)	-	1788969..1790159 (-)	1191	WP_000167753.1	acetate kinase	-
AAYT22_RS09265 (AAYT22_09255)	comYH	1790210..1791163 (-)	954	WP_000345126.1	class I SAM-dependent methyltransferase	Machinery gene
AAYT22_RS09270 (AAYT22_09260)	-	1791224..1791818 (-)	595	Protein_1799	class I SAM-dependent methyltransferase	-
AAYT22_RS09275 (AAYT22_09265)	comGG/cglG	1791955..1792368 (-)	414	WP_000265620.1	competence type IV pilus minor pilin ComGG	Machinery gene
AAYT22_RS09280 (AAYT22_09270)	comGF/cglF	1792346..1792807 (-)	462	WP_000250540.1	competence type IV pilus minor pilin ComGF	Machinery gene
AAYT22_RS09285 (AAYT22_09275)	comGE/cglE	1792770..1793072 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
AAYT22_RS09290 (AAYT22_09280)	comGD/cglD	1793035..1793439 (-)	405	WP_000588023.1	competence type IV pilus minor pilin ComGD	Machinery gene
AAYT22_RS09295 (AAYT22_09285)	comGC/cglC	1793432..1793758 (-)	327	WP_000738631.1	comG operon protein ComGC	Machinery gene
AAYT22_RS09300 (AAYT22_09290)	comGB/cglB	1793760..1794776 (-)	1017	WP_075218762.1	competence type IV pilus assembly protein ComGB	Machinery gene
AAYT22_RS09305 (AAYT22_09295)	comGA/cglA/cilD	1794724..1795665 (-)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
AAYT22_RS09310 (AAYT22_09300)	-	1795741..1796106 (-)	366	WP_000286415.1	DUF1033 family protein	-
AAYT22_RS09315 (AAYT22_09305)	-	1796257..1797315 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14638.82 Da
• Isoelectric Point: 10.2164

>NTDB_id=994405 AAYT22_RS09290 WP_000588023.1 1793035..1793439(-) (comGD/cglD) [Streptococcus pneumoniae strain 20155336]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=994405 AAYT22_RS09290 WP_000588023.1 1793035..1793439(-) (comGD/cglD) [Streptococcus pneumoniae strain 20155336]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	98.507	100	0.985
comGD/cglD	Streptococcus pneumoniae Rx1	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae D39	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae R6	97.761	100	0.978
comGD/cglD	Streptococcus mitis SK321	97.015	100	0.97
comGD/cglD	Streptococcus mitis NCTC 12261	97.744	99.254	0.97
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47