Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilAI | Type | Machinery gene |
| Locus tag | AASM09_RS17720 | Genome accession | NZ_CP154630 |
| Coordinates | 3834240..3834647 (-) | Length | 135 a.a. |
| NCBI ID | WP_049429914.1 | Uniprot ID | A0AA42QIU5 |
| Organism | Stenotrophomonas maltophilia strain C52 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3829240..3839647
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AASM09_RS17710 (AASM09_17710) | pilR | 3830800..3832173 (+) | 1374 | WP_005410795.1 | sigma-54 dependent transcriptional regulator | Regulator |
| AASM09_RS17715 (AASM09_17715) | pilB | 3832284..3834017 (-) | 1734 | WP_005414305.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| AASM09_RS17720 (AASM09_17720) | pilA/pilAI | 3834240..3834647 (-) | 408 | WP_049429914.1 | pilin | Machinery gene |
| AASM09_RS17725 (AASM09_17725) | - | 3834798..3835229 (-) | 432 | WP_049429913.1 | pilin | - |
| AASM09_RS17730 (AASM09_17730) | pilC | 3835583..3836842 (+) | 1260 | WP_343368554.1 | type II secretion system F family protein | Machinery gene |
| AASM09_RS17735 (AASM09_17735) | - | 3836850..3837713 (+) | 864 | WP_049429911.1 | A24 family peptidase | - |
| AASM09_RS17740 (AASM09_17740) | coaE | 3837725..3838336 (+) | 612 | WP_049429910.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 135 a.a. Molecular weight: 14285.50 Da Isoelectric Point: 6.2108
>NTDB_id=993832 AASM09_RS17720 WP_049429914.1 3834240..3834647(-) (pilA/pilAI) [Stenotrophomonas maltophilia strain C52]
MYTQKGFTLIELMIVVAIIAILAAIATVAFQPYVVRTQLAAALADITPGKTKVEILVNENRPASLVTADLIGGAQNAHCS
NVEAELSESGVGHISCTLKGHSVLDGKDLILRRSAEGIWSCDGSAFEARYRPTGC
MYTQKGFTLIELMIVVAIIAILAAIATVAFQPYVVRTQLAAALADITPGKTKVEILVNENRPASLVTADLIGGAQNAHCS
NVEAELSESGVGHISCTLKGHSVLDGKDLILRRSAEGIWSCDGSAFEARYRPTGC
Nucleotide
Download Length: 408 bp
>NTDB_id=993832 AASM09_RS17720 WP_049429914.1 3834240..3834647(-) (pilA/pilAI) [Stenotrophomonas maltophilia strain C52]
ATGTACACCCAGAAGGGTTTCACGCTCATCGAACTGATGATCGTGGTGGCCATCATCGCGATCCTTGCGGCGATTGCGAC
TGTGGCATTTCAGCCATACGTCGTGCGCACCCAGTTGGCGGCGGCGCTTGCGGATATCACGCCGGGAAAGACCAAGGTGG
AAATCCTCGTCAACGAGAACCGTCCGGCCAGTCTGGTGACAGCCGATCTTATCGGCGGTGCCCAGAACGCCCACTGCTCC
AACGTCGAGGCCGAGCTCAGTGAATCCGGTGTCGGCCATATCAGCTGCACCCTGAAGGGCCACAGCGTGCTGGACGGCAA
GGACCTGATCCTGCGCCGCTCCGCCGAGGGCATCTGGAGCTGCGATGGCAGCGCGTTCGAAGCGCGCTATCGCCCGACCG
GCTGCTGA
ATGTACACCCAGAAGGGTTTCACGCTCATCGAACTGATGATCGTGGTGGCCATCATCGCGATCCTTGCGGCGATTGCGAC
TGTGGCATTTCAGCCATACGTCGTGCGCACCCAGTTGGCGGCGGCGCTTGCGGATATCACGCCGGGAAAGACCAAGGTGG
AAATCCTCGTCAACGAGAACCGTCCGGCCAGTCTGGTGACAGCCGATCTTATCGGCGGTGCCCAGAACGCCCACTGCTCC
AACGTCGAGGCCGAGCTCAGTGAATCCGGTGTCGGCCATATCAGCTGCACCCTGAAGGGCCACAGCGTGCTGGACGGCAA
GGACCTGATCCTGCGCCGCTCCGCCGAGGGCATCTGGAGCTGCGATGGCAGCGCGTTCGAAGCGCGCTATCGCCCGACCG
GCTGCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
50.735 |
100 |
0.511 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.647 |
100 |
0.43 |
| pilA | Pseudomonas aeruginosa PAK |
37.584 |
100 |
0.415 |
| pilA | Acinetobacter baumannii strain A118 |
40.146 |
100 |
0.407 |
| comP | Acinetobacter baylyi ADP1 |
33.562 |
100 |
0.363 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
36.567 |
99.259 |
0.363 |