Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | QMG91_RS05330 | Genome accession | NZ_AP027049 |
| Coordinates | 1112834..1113154 (+) | Length | 106 a.a. |
| NCBI ID | WP_022551233.1 | Uniprot ID | U4KDA9 |
| Organism | Vibrio nigripulchritudo strain TUMSAT-V.nig2 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1107834..1118154
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMG91_RS05320 (TUMSATVNIG2_10020) | - | 1110236..1110508 (+) | 273 | WP_004406206.1 | HU family DNA-binding protein | - |
| QMG91_RS05325 (TUMSATVNIG2_10030) | ppiD | 1110836..1112707 (+) | 1872 | WP_022590033.1 | peptidylprolyl isomerase | - |
| QMG91_RS05330 (TUMSATVNIG2_10040) | comEA | 1112834..1113154 (+) | 321 | WP_022551233.1 | ComEA family DNA-binding protein | Machinery gene |
| QMG91_RS05335 (TUMSATVNIG2_10050) | rrtA | 1113211..1113777 (-) | 567 | WP_022598155.1 | rhombosortase | - |
| QMG91_RS05340 (TUMSATVNIG2_10060) | - | 1113766..1114386 (+) | 621 | WP_281829301.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| QMG91_RS05345 (TUMSATVNIG2_10070) | - | 1114419..1115738 (-) | 1320 | WP_281829303.1 | anti-phage deoxyguanosine triphosphatase | - |
| QMG91_RS05350 (TUMSATVNIG2_10080) | yfbR | 1115786..1116370 (-) | 585 | WP_281870188.1 | 5'-deoxynucleotidase | - |
| QMG91_RS05355 (TUMSATVNIG2_10090) | - | 1116518..1117732 (-) | 1215 | WP_022613111.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11208.93 Da Isoelectric Point: 9.8209
>NTDB_id=99320 QMG91_RS05330 WP_022551233.1 1112834..1113154(+) (comEA) [Vibrio nigripulchritudo strain TUMSAT-V.nig2]
MKIIKLALIAALSLCSAVSANAWESNSPSKAASSSDKHAGIEITVNINTATAEELQTLLIGIGAKKAKTIVEFREKNGLF
QSADDLSKVKGIGNATVDKNRDRILL
MKIIKLALIAALSLCSAVSANAWESNSPSKAASSSDKHAGIEITVNINTATAEELQTLLIGIGAKKAKTIVEFREKNGLF
QSADDLSKVKGIGNATVDKNRDRILL
Nucleotide
Download Length: 321 bp
>NTDB_id=99320 QMG91_RS05330 WP_022551233.1 1112834..1113154(+) (comEA) [Vibrio nigripulchritudo strain TUMSAT-V.nig2]
ATGAAAATCATAAAACTGGCTTTGATAGCCGCTCTTTCTCTTTGCTCTGCCGTTTCTGCAAACGCGTGGGAGTCAAATTC
GCCATCTAAAGCGGCTTCAAGCAGTGATAAGCATGCTGGAATAGAAATTACCGTAAACATCAATACAGCAACCGCTGAGG
AGCTACAAACGCTTTTAATCGGCATAGGTGCTAAGAAGGCGAAAACCATCGTAGAGTTTCGTGAAAAGAACGGGTTATTT
CAGTCTGCAGACGATTTGAGTAAAGTGAAGGGTATTGGCAACGCTACAGTTGACAAGAATCGTGACCGAATTCTGCTGTA
G
ATGAAAATCATAAAACTGGCTTTGATAGCCGCTCTTTCTCTTTGCTCTGCCGTTTCTGCAAACGCGTGGGAGTCAAATTC
GCCATCTAAAGCGGCTTCAAGCAGTGATAAGCATGCTGGAATAGAAATTACCGTAAACATCAATACAGCAACCGCTGAGG
AGCTACAAACGCTTTTAATCGGCATAGGTGCTAAGAAGGCGAAAACCATCGTAGAGTTTCGTGAAAAGAACGGGTTATTT
CAGTCTGCAGACGATTTGAGTAAAGTGAAGGGTATTGGCAACGCTACAGTTGACAAGAATCGTGACCGAATTCTGCTGTA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
56.122 |
92.453 |
0.519 |
| comEA | Vibrio cholerae C6706 |
56.122 |
92.453 |
0.519 |
| comEA | Vibrio campbellii strain DS40M4 |
56.842 |
89.623 |
0.509 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.037 |
100 |
0.453 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
61.842 |
71.698 |
0.443 |
| comEA | Acinetobacter baylyi ADP1 |
50 |
75.472 |
0.377 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
62.903 |
58.491 |
0.368 |