Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | AAIA71_RS13025 | Genome accession | NZ_CP154266 |
| Coordinates | 2791789..2792088 (-) | Length | 99 a.a. |
| NCBI ID | WP_005446580.1 | Uniprot ID | A0A3A1QB85 |
| Organism | Vibrio harveyi strain N8T11 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2786789..2797088
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAIA71_RS13000 (AAIA71_13000) | - | 2787207..2788421 (+) | 1215 | WP_005446588.1 | pyridoxal phosphate-dependent aminotransferase | - |
| AAIA71_RS13005 (AAIA71_13005) | yfbR | 2788505..2789089 (+) | 585 | WP_005425568.1 | 5'-deoxynucleotidase | - |
| AAIA71_RS13010 (AAIA71_13010) | - | 2789093..2790427 (+) | 1335 | WP_050923119.1 | anti-phage deoxyguanosine triphosphatase | - |
| AAIA71_RS13015 (AAIA71_13015) | - | 2790464..2791081 (-) | 618 | WP_005446584.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| AAIA71_RS13020 (AAIA71_13020) | rrtA | 2791085..2791636 (+) | 552 | WP_005446582.1 | rhombosortase | - |
| AAIA71_RS13025 (AAIA71_13025) | comEA | 2791789..2792088 (-) | 300 | WP_005446580.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| AAIA71_RS13030 (AAIA71_13030) | ppiD | 2792234..2794093 (-) | 1860 | WP_009698342.1 | peptidylprolyl isomerase | - |
| AAIA71_RS13035 (AAIA71_13035) | - | 2794309..2794581 (-) | 273 | WP_005430934.1 | HU family DNA-binding protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10936.80 Da Isoelectric Point: 8.9385
>NTDB_id=992846 AAIA71_RS13025 WP_005446580.1 2791789..2792088(-) (comEA) [Vibrio harveyi strain N8T11]
MKWMLTLCLLLLAPMSWAEESKSANTKAAKYEGIEITVNVNTASAQEIATMLKGIGEKKAKDIVEYRNEHGPFKTVADLT
KVKGIGDATVKKNEERILL
MKWMLTLCLLLLAPMSWAEESKSANTKAAKYEGIEITVNVNTASAQEIATMLKGIGEKKAKDIVEYRNEHGPFKTVADLT
KVKGIGDATVKKNEERILL
Nucleotide
Download Length: 300 bp
>NTDB_id=992846 AAIA71_RS13025 WP_005446580.1 2791789..2792088(-) (comEA) [Vibrio harveyi strain N8T11]
ATGAAATGGATGTTAACACTGTGCTTATTACTCTTAGCACCGATGAGCTGGGCAGAAGAGAGTAAGTCGGCTAACACAAA
AGCAGCTAAGTACGAAGGTATCGAGATTACGGTAAACGTAAATACAGCTTCAGCGCAAGAGATTGCCACCATGCTAAAGG
GTATTGGTGAGAAAAAAGCGAAAGATATCGTCGAATATCGTAATGAACACGGTCCTTTTAAAACCGTTGCGGATCTGACC
AAAGTGAAGGGCATTGGCGATGCCACGGTGAAAAAGAATGAAGAGCGTATTTTGTTGTAA
ATGAAATGGATGTTAACACTGTGCTTATTACTCTTAGCACCGATGAGCTGGGCAGAAGAGAGTAAGTCGGCTAACACAAA
AGCAGCTAAGTACGAAGGTATCGAGATTACGGTAAACGTAAATACAGCTTCAGCGCAAGAGATTGCCACCATGCTAAAGG
GTATTGGTGAGAAAAAAGCGAAAGATATCGTCGAATATCGTAATGAACACGGTCCTTTTAAAACCGTTGCGGATCTGACC
AAAGTGAAGGGCATTGGCGATGCCACGGTGAAAAAGAATGAAGAGCGTATTTTGTTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio campbellii strain DS40M4 |
82.828 |
100 |
0.828 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
75.758 |
100 |
0.758 |
| comEA | Vibrio cholerae C6706 |
56.566 |
100 |
0.566 |
| comEA | Vibrio cholerae strain A1552 |
56.566 |
100 |
0.566 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
41.071 |
100 |
0.465 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
39.252 |
100 |
0.424 |
| comEA | Legionella pneumophila str. Paris |
37.374 |
100 |
0.374 |
| comEA | Legionella pneumophila strain ERS1305867 |
37.374 |
100 |
0.374 |