Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | QMG95_RS05295 | Genome accession | NZ_AP027045 |
| Coordinates | 1107781..1108101 (+) | Length | 106 a.a. |
| NCBI ID | WP_022551233.1 | Uniprot ID | U4KDA9 |
| Organism | Vibrio nigripulchritudo strain TUMSAT-V.nig1 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1102781..1113101
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMG95_RS05285 (TUMSATVNIG1_09900) | - | 1105183..1105455 (+) | 273 | WP_004406206.1 | HU family DNA-binding protein | - |
| QMG95_RS05290 (TUMSATVNIG1_09910) | ppiD | 1105783..1107654 (+) | 1872 | WP_200766880.1 | peptidylprolyl isomerase | - |
| QMG95_RS05295 (TUMSATVNIG1_09920) | comEA | 1107781..1108101 (+) | 321 | WP_022551233.1 | ComEA family DNA-binding protein | Machinery gene |
| QMG95_RS05300 (TUMSATVNIG1_09930) | rrtA | 1108158..1108724 (-) | 567 | WP_200766881.1 | rhombosortase | - |
| QMG95_RS05305 (TUMSATVNIG1_09940) | - | 1108713..1109333 (+) | 621 | WP_200766882.1 | DTW domain-containing protein | - |
| QMG95_RS05310 (TUMSATVNIG1_09950) | - | 1109366..1110685 (-) | 1320 | WP_200766883.1 | anti-phage deoxyguanosine triphosphatase | - |
| QMG95_RS05315 (TUMSATVNIG1_09960) | yfbR | 1110733..1111317 (-) | 585 | WP_004406194.1 | 5'-deoxynucleotidase | - |
| QMG95_RS05320 (TUMSATVNIG1_09970) | - | 1111465..1112679 (-) | 1215 | WP_200766884.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11208.93 Da Isoelectric Point: 9.8209
>NTDB_id=99276 QMG95_RS05295 WP_022551233.1 1107781..1108101(+) (comEA) [Vibrio nigripulchritudo strain TUMSAT-V.nig1]
MKIIKLALIAALSLCSAVSANAWESNSPSKAASSSDKHAGIEITVNINTATAEELQTLLIGIGAKKAKTIVEFREKNGLF
QSADDLSKVKGIGNATVDKNRDRILL
MKIIKLALIAALSLCSAVSANAWESNSPSKAASSSDKHAGIEITVNINTATAEELQTLLIGIGAKKAKTIVEFREKNGLF
QSADDLSKVKGIGNATVDKNRDRILL
Nucleotide
Download Length: 321 bp
>NTDB_id=99276 QMG95_RS05295 WP_022551233.1 1107781..1108101(+) (comEA) [Vibrio nigripulchritudo strain TUMSAT-V.nig1]
ATGAAAATCATAAAACTGGCTTTGATAGCCGCTCTTTCTCTTTGCTCTGCCGTATCTGCAAACGCGTGGGAGTCAAATTC
GCCATCTAAAGCGGCTTCAAGCAGTGATAAGCATGCTGGAATAGAAATTACCGTAAACATCAATACGGCGACCGCTGAGG
AGCTGCAAACGCTTTTAATCGGCATAGGTGCTAAGAAGGCGAAAACCATCGTAGAGTTTCGGGAAAAGAACGGGTTATTT
CAGTCTGCAGACGATTTGAGCAAAGTGAAGGGTATTGGCAACGCTACCGTTGACAAGAATCGTGACCGAATTCTGCTGTA
G
ATGAAAATCATAAAACTGGCTTTGATAGCCGCTCTTTCTCTTTGCTCTGCCGTATCTGCAAACGCGTGGGAGTCAAATTC
GCCATCTAAAGCGGCTTCAAGCAGTGATAAGCATGCTGGAATAGAAATTACCGTAAACATCAATACGGCGACCGCTGAGG
AGCTGCAAACGCTTTTAATCGGCATAGGTGCTAAGAAGGCGAAAACCATCGTAGAGTTTCGGGAAAAGAACGGGTTATTT
CAGTCTGCAGACGATTTGAGCAAAGTGAAGGGTATTGGCAACGCTACCGTTGACAAGAATCGTGACCGAATTCTGCTGTA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
56.122 |
92.453 |
0.519 |
| comEA | Vibrio cholerae C6706 |
56.122 |
92.453 |
0.519 |
| comEA | Vibrio campbellii strain DS40M4 |
56.842 |
89.623 |
0.509 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.037 |
100 |
0.453 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
61.842 |
71.698 |
0.443 |
| comEA | Acinetobacter baylyi ADP1 |
50 |
75.472 |
0.377 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
62.903 |
58.491 |
0.368 |