Detailed information NTG0988640

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: AAC934_RS17730
• Genome accession: NZ_CP152362
• Coordinates: 3435986..3436579 (+)
• Length: 197 a.a.
• NCBI ID: WP_038427933.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain LP
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3430986..3441579

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAC934_RS17700 (AAC934_17700)	psmA	3431242..3431577 (+)	336	WP_014480966.1	SMR family transporter	-
AAC934_RS17705 (AAC934_17705)	psmB	3431577..3431897 (+)	321	WP_003228222.1	QacE family quaternary ammonium compound efflux SMR transporter	-
AAC934_RS17710 (AAC934_17710)	yvdQ	3431933..3432445 (-)	513	WP_003243249.1	DUF3231 family protein	-
AAC934_RS17715 (AAC934_17715)	cotNP	3432697..3434040 (-)	1344	WP_029725961.1	FAD-binding oxidoreductase	-
AAC934_RS17720 (AAC934_17720)	cotR	3434396..3435358 (+)	963	WP_217024096.1	sporulation hydrolase CotR	-
AAC934_RS17730 (AAC934_17730)	clpP	3435986..3436579 (+)	594	WP_038427933.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
AAC934_RS17735 (AAC934_17735)	pgmB	3436641..3437315 (-)	675	WP_038427934.1	beta-phosphoglucomutase	-
AAC934_RS17740 (AAC934_17740)	malL	3437312..3438997 (-)	1686	WP_106073375.1	oligo-1,6-glucosidase	-
AAC934_RS17745 (AAC934_17745)	mdxK	3438990..3441263 (-)	2274	WP_217024094.1	maltose phosphorylase	-

Sequence

Protein

• Length: 197 a.a.
• Molecular weight: 21667.97 Da
• Isoelectric Point: 4.9349

>NTDB_id=988640 AAC934_RS17730 WP_038427933.1 3435986..3436579(+) (clpP) [Bacillus subtilis strain LP]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALDYGLIDKILTHTEDKK

Nucleotide

• Length: 594 bp

>NTDB_id=988640 AAC934_RS17730 WP_038427933.1 3435986..3436579(+) (clpP) [Bacillus subtilis strain LP]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTATATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGTGCGCAAGGTCAGGCGA
CAGAAATTGAAATTGCCGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTTGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGATTACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGACAAAAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	99.492	100	0.995
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.085	95.431	0.65
clpP	Streptococcus thermophilus LMG 18311	57.653	99.492	0.574
clpP	Streptococcus thermophilus LMD-9	57.653	99.492	0.574
clpP	Streptococcus pneumoniae D39	57.292	97.462	0.558
clpP	Streptococcus pneumoniae Rx1	57.292	97.462	0.558
clpP	Streptococcus pneumoniae R6	57.292	97.462	0.558
clpP	Streptococcus pneumoniae TIGR4	57.292	97.462	0.558
clpP	Streptococcus pyogenes JRS4	56.122	99.492	0.558
clpP	Streptococcus pyogenes MGAS315	56.122	99.492	0.558
clpP	Lactococcus lactis subsp. cremoris KW2	57.368	96.447	0.553
clpP	Streptococcus mutans UA159	54.822	100	0.548
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.263	96.447	0.533