Detailed information NTG0988169

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: AAEU35_RS04065
• Genome accession: NZ_CP152294
• Coordinates: 861285..861884 (+)
• Length: 199 a.a.
• NCBI ID: WP_003129593.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain Q13
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 856285..866884

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAEU35_RS04050	-	858456..859619 (+)	1164	WP_058221072.1	ABC transporter permease	-
AAEU35_RS04055	spx	860001..860399 (-)	399	WP_003129597.1	transcriptional regulator Spx	-
AAEU35_RS04060	-	860558..861088 (-)	531	WP_003129594.1	hypothetical protein	-
AAEU35_RS04065	clpP	861285..861884 (+)	600	WP_003129593.1	ATP-dependent Clp protease proteolytic subunit	Regulator
AAEU35_RS04070	icd	861950..863188 (-)	1239	WP_010905501.1	NADP-dependent isocitrate dehydrogenase	-
AAEU35_RS04075	acnA	863209..865755 (-)	2547	WP_058223454.1	aconitate hydratase AcnA	-

Sequence

Protein

• Length: 199 a.a.
• Molecular weight: 22082.24 Da
• Isoelectric Point: 4.7423

>NTDB_id=988169 AAEU35_RS04065 WP_003129593.1 861285..861884(+) (clpP) [Lactococcus lactis strain Q13]
MGYLVPTVIEQSSRGERAYDIYSRLLKDRIIMLTGPVEDGMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVD
TMNFIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYLIHQPMGGTGQGTQQTDMAIVAEQLLKTRKRLEQILADN
SNRSLEQIHKDAERDHWMDAKETLEYGFIDEIMENNSLK

Nucleotide

• Length: 600 bp

>NTDB_id=988169 AAEU35_RS04065 WP_003129593.1 861285..861884(+) (clpP) [Lactococcus lactis strain Q13]
ATGGGTTATTTAGTACCTACCGTTATTGAACAATCAAGCCGTGGCGAACGTGCTTATGATATTTATTCACGACTTTTAAA
AGACCGCATTATCATGCTGACAGGACCTGTTGAAGATGGAATGGCAAATTCTATCATTGCTCAACTTCTTTTCTTGGATG
CACAAGATAACACTAAAGATATTTATCTCTACGTAAATACACCTGGTGGTTCTGTATCTGCTGGTCTTGCCATTGTTGAT
ACAATGAATTTTATCAAATCAGATGTTCAAACTATCGTTATGGGAATGGCTGCCTCTATGGGAACAATCATTGCTTCAAG
CGGAACAAAAGGCAAACGATTCATGTTGCCAAATGCTGAATATCTTATTCACCAACCAATGGGTGGTACAGGTCAAGGCA
CTCAACAAACTGATATGGCTATTGTTGCTGAGCAACTTTTGAAAACTCGTAAACGTTTGGAACAAATTCTTGCTGATAAT
TCCAACCGTTCACTTGAACAAATTCACAAAGATGCCGAACGTGACCATTGGATGGATGCCAAAGAAACTTTGGAATATGG
TTTCATCGATGAAATTATGGAAAATAATTCCTTAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-195)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	100	100	1
clpP	Lactococcus lactis subsp. cremoris KW2	99.497	100	0.995
clpP	Streptococcus mutans UA159	87.755	98.492	0.864
clpP	Streptococcus thermophilus LMD-9	87.245	98.492	0.859
clpP	Streptococcus thermophilus LMG 18311	87.245	98.492	0.859
clpP	Streptococcus pyogenes MGAS315	86.224	98.492	0.849
clpP	Streptococcus pyogenes JRS4	86.224	98.492	0.849
clpP	Streptococcus pneumoniae D39	85.128	97.99	0.834
clpP	Streptococcus pneumoniae TIGR4	85.128	97.99	0.834
clpP	Streptococcus pneumoniae R6	85.128	97.99	0.834
clpP	Streptococcus pneumoniae Rx1	85.128	97.99	0.834
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.477	96.985	0.548
clpP	Bacillus subtilis subsp. subtilis str. 168	57.368	95.477	0.548