Detailed information
Bioinformatically predicted
Overview
| Name | rarA | Type | Machinery gene |
| Locus tag | ACOCJC_RS08360 | Genome accession | NZ_CP184549 |
| Coordinates | 1660112..1661386 (-) | Length | 424 a.a. |
| NCBI ID | WP_000102740.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain SCTW2019145 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1655112..1666386
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCJC_RS08335 (ACOCJC_08335) | hisS | 1655673..1656935 (+) | 1263 | WP_000590826.1 | histidine--tRNA ligase | - |
| ACOCJC_RS08340 (ACOCJC_08340) | aspS | 1656951..1658717 (+) | 1767 | WP_000044794.1 | aspartate--tRNA ligase | - |
| ACOCJC_RS08350 (ACOCJC_08350) | - | 1659050..1659178 (+) | 129 | WP_014937034.1 | hypothetical protein | - |
| ACOCJC_RS08355 (ACOCJC_08355) | - | 1659178..1659951 (+) | 774 | WP_000682648.1 | tRNA threonylcarbamoyladenosine dehydratase | - |
| ACOCJC_RS08360 (ACOCJC_08360) | rarA | 1660112..1661386 (-) | 1275 | WP_000102740.1 | replication-associated recombination protein A | Machinery gene |
| ACOCJC_RS08365 (ACOCJC_08365) | cymR | 1661471..1661893 (+) | 423 | WP_000704122.1 | cysteine metabolism transcriptional regulator CymR | - |
| ACOCJC_RS08370 (ACOCJC_08370) | - | 1661993..1662175 (+) | 183 | WP_000752909.1 | CsbD family protein | - |
| ACOCJC_RS08375 (ACOCJC_08375) | - | 1662215..1662361 (+) | 147 | WP_000009235.1 | SAS049 family protein | - |
| ACOCJC_RS08380 (ACOCJC_08380) | - | 1662598..1663611 (-) | 1014 | WP_000985891.1 | LLM class flavin-dependent oxidoreductase | - |
| ACOCJC_RS08385 (ACOCJC_08385) | - | 1663922..1665064 (+) | 1143 | WP_000409167.1 | cysteine desulfurase family protein | - |
| ACOCJC_RS08390 (ACOCJC_08390) | mnmA | 1665065..1666183 (+) | 1119 | WP_000066097.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
Sequence
Protein
Download Length: 424 a.a. Molecular weight: 47264.84 Da Isoelectric Point: 8.3539
>NTDB_id=986319 ACOCJC_RS08360 WP_000102740.1 1660112..1661386(-) (rarA) [Staphylococcus aureus strain SCTW2019145]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP
Nucleotide
Download Length: 1275 bp
>NTDB_id=986319 ACOCJC_RS08360 WP_000102740.1 1660112..1661386(-) (rarA) [Staphylococcus aureus strain SCTW2019145]
GTGAGTACAGAACCATTAGCGTCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACACTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACACAATATAAATTTAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATCCATCGACTAGATAAAGC
CAAACAAGATTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTAATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTTCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCTATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGCTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAGGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGCTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATCCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAATTTACTTAAACAAAGGCCATAA
GTGAGTACAGAACCATTAGCGTCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACACTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACACAATATAAATTTAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATCCATCGACTAGATAAAGC
CAAACAAGATTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTAATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTTCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCTATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGCTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAGGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGCTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATCCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAATTTACTTAAACAAAGGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rarA | Bacillus subtilis subsp. subtilis str. 168 |
69.286 |
99.057 |
0.686 |