Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   MHH37_RS05465 Genome accession   NZ_CP152038
Coordinates   1142335..1143594 (+) Length   419 a.a.
NCBI ID   WP_342575326.1    Uniprot ID   -
Organism   Solibacillus sp. FSL K6-1781     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1137335..1148594
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH37_RS05440 (MHH37_05440) - 1138359..1139087 (+) 729 WP_008403202.1 SDR family oxidoreductase -
  MHH37_RS05445 (MHH37_05445) - 1139135..1139392 (+) 258 WP_008403201.1 DUF3243 domain-containing protein -
  MHH37_RS05450 (MHH37_05450) - 1139660..1140448 (+) 789 WP_008403200.1 DUF3388 domain-containing protein -
  MHH37_RS05455 (MHH37_05455) - 1140503..1141405 (+) 903 WP_231918688.1 RodZ domain-containing protein -
  MHH37_RS05460 (MHH37_05460) pgsA 1141452..1142030 (+) 579 WP_342575325.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  MHH37_RS05465 (MHH37_05465) cinA 1142335..1143594 (+) 1260 WP_342575326.1 competence/damage-inducible protein A Machinery gene
  MHH37_RS05470 (MHH37_05470) recA 1143761..1144834 (+) 1074 WP_339264003.1 recombinase RecA Machinery gene
  MHH37_RS05475 (MHH37_05475) rny 1145566..1147119 (+) 1554 WP_008403194.1 ribonuclease Y -
  MHH37_RS05480 (MHH37_05480) - 1147396..1148160 (+) 765 WP_342575329.1 CpsB/CapC family capsule biosynthesis tyrosine phosphatase -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 45814.43 Da        Isoelectric Point: 4.8121

>NTDB_id=986259 MHH37_RS05465 WP_342575326.1 1142335..1143594(+) (cinA) [Solibacillus sp. FSL K6-1781]
MNAEIIAVGSELLLGQIANTNAKFISSQLSELGINVYYHTVVGDNEARLLEAIKIAEQRADVIIFSGGLGPTKDDLTKEA
IAKHLNRTLVFDETALFAIEEFFSKQRRPMTENNRKQALVLDGCDVLLNQHGMAPGMFLEENDRIYILLPGPPKELEPMF
QYETKPKLAALLHDGGVILSHVLRFYGIGEADMETRIQSILDEQTNPTVAPLASDGEVTLRITAKAQNEQQAFRLIELKK
REILDIVGEYYYGVNDESLGFKLVQMLLENELTVSAAESLTAGLFQSELAEIPGVGSALIGGVVTYTKEAKIKHLGVSGE
LLDEKGIVSSECAAAMATQVREKFGTDIGVGLTGAAGPGDHDGQPAGSIWVGIKIGDTEPLTYRLQLTGSRNTNRIRAVK
FTFSYLMRELANQGYKKLI

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=986259 MHH37_RS05465 WP_342575326.1 1142335..1143594(+) (cinA) [Solibacillus sp. FSL K6-1781]
ATGAATGCAGAAATTATAGCGGTAGGATCGGAATTATTATTAGGACAAATCGCCAACACGAATGCGAAATTTATTTCGAG
CCAGCTTTCGGAACTTGGCATTAATGTTTATTATCATACAGTTGTAGGAGATAACGAGGCGCGGCTACTAGAGGCGATCA
AAATTGCGGAACAGCGCGCGGATGTAATTATTTTCTCAGGTGGTTTAGGTCCGACAAAGGATGATCTGACGAAAGAAGCG
ATTGCGAAGCATTTGAATCGTACGTTAGTATTTGATGAAACGGCGCTGTTTGCGATTGAGGAATTTTTCTCGAAGCAAAG
ACGACCGATGACGGAAAACAACCGGAAACAGGCGCTAGTGCTGGATGGCTGCGATGTCTTGTTGAACCAGCATGGGATGG
CACCGGGTATGTTTTTGGAGGAAAATGACCGTATTTATATTTTACTGCCGGGTCCGCCAAAAGAACTTGAGCCAATGTTC
CAATATGAAACGAAGCCAAAACTGGCGGCACTTCTACATGACGGCGGGGTAATTTTATCGCATGTACTACGTTTTTACGG
GATCGGTGAAGCAGATATGGAAACCCGCATACAGAGTATTTTGGATGAACAGACAAACCCTACAGTTGCCCCGCTTGCTT
CAGATGGTGAAGTAACATTGCGCATTACGGCAAAAGCGCAAAACGAACAACAGGCATTCCGTCTGATTGAGTTAAAGAAA
CGTGAAATTCTCGATATCGTCGGAGAATACTATTACGGTGTAAATGATGAATCATTAGGTTTCAAGCTTGTGCAAATGCT
TCTTGAAAATGAATTAACAGTTTCCGCTGCTGAAAGTTTAACGGCCGGTCTGTTCCAGTCGGAGCTGGCAGAAATCCCGG
GTGTTGGATCTGCATTAATCGGCGGTGTTGTGACGTATACGAAAGAAGCGAAAATTAAGCACCTCGGTGTTTCCGGTGAA
CTGCTTGATGAAAAAGGCATCGTCAGCAGTGAATGTGCAGCAGCAATGGCAACACAAGTCCGTGAAAAGTTCGGTACAGA
TATCGGCGTTGGGTTGACAGGTGCAGCAGGACCGGGTGATCATGACGGACAGCCTGCAGGATCAATCTGGGTTGGCATAA
AGATCGGTGACACAGAACCGCTCACGTACCGACTGCAATTAACCGGTTCAAGAAATACGAACCGAATTCGCGCAGTGAAG
TTTACGTTCAGCTATTTAATGAGAGAATTAGCGAATCAAGGATACAAAAAGCTGATTTAG

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Competence-damaged protein (CinA)

(260-409)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-168)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

51.338

98.091

0.504
  cinA Streptococcus mutans UA159

43.614

99.045

0.432
  cinA Streptococcus mitis SK321

45.052

91.647

0.413
  cinA Streptococcus mitis NCTC 12261

44.792

91.647

0.411
  cinA Streptococcus pneumoniae TIGR4

44.531

91.647

0.408
  cinA Streptococcus pneumoniae Rx1

44.271

91.647

0.406
  cinA Streptococcus pneumoniae R6

44.271

91.647

0.406
  cinA Streptococcus pneumoniae D39

44.01

91.647

0.403

Multiple sequence alignment