Detailed information NTG0986088

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MHI58_RS17055
• Genome accession: NZ_CP152035
• Coordinates: 3288668..3289354 (-)
• Length: 228 a.a.
• NCBI ID: WP_176544677.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL K6-2869
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3283668..3294354

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHI58_RS17020 (MHI58_17020)	fliW	3283804..3284238 (-)	435	WP_025208061.1	flagellar assembly protein FliW	-
MHI58_RS17025 (MHI58_17025)	-	3284267..3284845 (-)	579	WP_024719238.1	DUF6470 family protein	-
MHI58_RS17030 (MHI58_17030)	flgL	3284892..3285803 (-)	912	WP_008348257.1	flagellar hook-associated protein FlgL	-
MHI58_RS17035 (MHI58_17035)	flgK	3285812..3287332 (-)	1521	WP_024719239.1	flagellar hook-associated protein FlgK	-
MHI58_RS17040 (MHI58_17040)	-	3287348..3287830 (-)	483	WP_039169793.1	flagellar protein FlgN	-
MHI58_RS17045 (MHI58_17045)	flgM	3287849..3288112 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
MHI58_RS17050 (MHI58_17050)	-	3288192..3288611 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
MHI58_RS17055 (MHI58_17055)	comFC	3288668..3289354 (-)	687	WP_176544677.1	ComF family protein	Machinery gene
MHI58_RS17060 (MHI58_17060)	-	3289351..3289644 (-)	294	WP_008348267.1	competence protein ComFB	-
MHI58_RS17065 (MHI58_17065)	comFA	3289709..3290836 (-)	1128	WP_045033977.1	DEAD/DEAH box helicase	Machinery gene
MHI58_RS17070 (MHI58_17070)	-	3291208..3292050 (-)	843	WP_024719242.1	DegV family protein	-
MHI58_RS17075 (MHI58_17075)	degU	3292262..3292951 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MHI58_RS17080 (MHI58_17080)	degS	3293016..3294191 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26143.69 Da
• Isoelectric Point: 10.3239

>NTDB_id=986088 MHI58_RS17055 WP_176544677.1 3288668..3289354(-) (comFC) [Bacillus sp. FSL K6-2869]
MICPICESHFVAAFTWKSFLLLNEDRLCVACKNHLMKIQGPTCPKCGRAQSNDQLCQDCSRWNKRRDFAEILVMNRSVYA
YNDFMKDILARFKFRGDTALADLFKKDVRSAFKRSFSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVH
QSKQSKKRKNERLHQQNLFQLRQSNPIVLKDIILIDDIYTTGATVYHAAKILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=986088 MHI58_RS17055 WP_176544677.1 3288668..3289354(-) (comFC) [Bacillus sp. FSL K6-2869]
TTGATTTGTCCAATTTGTGAGAGCCATTTTGTGGCTGCTTTTACATGGAAATCATTCCTACTATTAAATGAAGATCGTTT
ATGTGTAGCATGTAAGAACCACTTGATGAAGATTCAAGGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATCAAATGATC
AATTGTGTCAGGATTGTTCAAGGTGGAATAAACGACGGGATTTTGCTGAGATTCTTGTAATGAATCGGTCTGTTTATGCT
TACAACGACTTTATGAAAGATATTCTAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGA
TGTACGGTCAGCGTTTAAACGTTCTTTTTCAATCAAAGAACCGGTCCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAA
AGGAAAGAGGATTCAATCAGTCAATGATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACAT
CAAAGTAAGCAGTCTAAGAAAAGAAAAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGTCAAACCCGAT
CGTTCTAAAGGATATCATATTAATCGATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAG
ACGCAGGCGCCAAAAGTGTTTCCTCTTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

• Phosphoribosyl transferase domain (Pribosyltran) (161-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.565	100	0.5
comFC/cflB	Streptococcus mitis SK321	38.428	100	0.386
comFC/cflB	Streptococcus mitis NCTC 12261	37.991	100	0.382
comFC/cflB	Streptococcus pneumoniae R6	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae TIGR4	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae Rx1	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae D39	37.118	100	0.373