Detailed information NTG0985889

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MHI60_RS10090
• Genome accession: NZ_CP152032
• Coordinates: 2005702..2006388 (+)
• Length: 228 a.a.
• NCBI ID: WP_186437285.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL K6-3200
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2000702..2011388

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHI60_RS10065 (MHI60_10065)	degS	2000854..2002029 (+)	1176	WP_003213166.1	sensor histidine kinase	Regulator
MHI60_RS10070 (MHI60_10070)	degU	2002094..2002783 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MHI60_RS10075 (MHI60_10075)	-	2003002..2003844 (+)	843	WP_144483671.1	DegV family protein	-
MHI60_RS10080 (MHI60_10080)	comFA	2003965..2005362 (+)	1398	WP_144483668.1	DEAD/DEAH box helicase	Machinery gene
MHI60_RS10085 (MHI60_10085)	-	2005412..2005705 (+)	294	WP_041088040.1	competence protein ComFB	-
MHI60_RS10090 (MHI60_10090)	comFC	2005702..2006388 (+)	687	WP_186437285.1	ComF family protein	Machinery gene
MHI60_RS10095 (MHI60_10095)	-	2006445..2006864 (+)	420	WP_039181808.1	TIGR03826 family flagellar region protein	-
MHI60_RS10100 (MHI60_10100)	flgM	2006944..2007207 (+)	264	WP_095409676.1	flagellar biosynthesis anti-sigma factor FlgM	-
MHI60_RS10105 (MHI60_10105)	-	2007226..2007708 (+)	483	WP_144472023.1	flagellar protein FlgN	-
MHI60_RS10110 (MHI60_10110)	flgK	2007724..2009244 (+)	1521	WP_144483665.1	flagellar hook-associated protein FlgK	-
MHI60_RS10115 (MHI60_10115)	flgL	2009254..2010162 (+)	909	WP_144472025.1	flagellar hook-associated protein FlgL	-
MHI60_RS10120 (MHI60_10120)	-	2010209..2010787 (+)	579	WP_095409672.1	DUF6470 family protein	-
MHI60_RS10125 (MHI60_10125)	fliW	2010816..2011250 (+)	435	WP_075611996.1	flagellar assembly protein FliW	-

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26161.69 Da
• Isoelectric Point: 9.9366

>NTDB_id=985889 MHI60_RS10090 WP_186437285.1 2005702..2006388(+) (comFC) [Bacillus sp. FSL K6-3200]
MICPICDGHFVHAFTWKSLLLLNDERLCVACKNQLVKIERPICPTCGRAQSNDQMCQDCDRWNERIDSTKVLIKNRSVYI
YNELMKDVFARFKFRGDTALVELFKRDVQAAFKRSFCIKDPLLIPIPLSNERLKERGFNQSVIIASLIGKPILQPLVKIH
QSKQSKKKKNERLDQKGLFQIKQTNVIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=985889 MHI60_RS10090 WP_186437285.1 2005702..2006388(+) (comFC) [Bacillus sp. FSL K6-3200]
TTGATTTGCCCGATTTGCGATGGACATTTTGTGCATGCTTTTACATGGAAATCATTACTTCTATTAAATGATGAGCGTCT
TTGTGTAGCATGTAAGAATCAATTAGTAAAGATTGAGCGTCCTATTTGTCCAACCTGCGGAAGAGCGCAGTCAAATGATC
AAATGTGCCAAGACTGTGATAGATGGAATGAACGCATTGATTCTACTAAAGTCCTTATAAAAAATAGGTCAGTTTATATC
TACAACGAGTTGATGAAAGATGTCTTTGCCCGCTTTAAATTTCGGGGTGATACGGCTTTAGTTGAGCTGTTTAAACGAGA
TGTACAAGCAGCATTTAAACGTTCCTTCTGCATAAAAGACCCATTGCTGATCCCGATCCCTTTAAGTAATGAAAGACTAA
AAGAAAGAGGGTTTAATCAGTCCGTTATCATCGCTTCCTTGATAGGTAAGCCGATATTGCAGCCACTCGTGAAAATACAT
CAAAGTAAGCAGTCCAAAAAAAAGAAAAATGAACGCCTAGATCAAAAAGGTTTGTTTCAAATAAAGCAAACAAATGTGAT
TGTTCAAAGAGATATTATATTAGTTGATGATATCTATACAACGGGAGCAACCATTTATGATGCGGCAAGAATTTTGAAAG
ACGCAGGTGCCAAAAGTGTTTCTTCTTTTACGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

• Phosphoribosyl transferase domain (Pribosyltran) (142-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	48.261	100	0.487
comFC/cflB	Streptococcus mitis NCTC 12261	36.681	100	0.368
comFC/cflB	Streptococcus mitis SK321	36.681	100	0.368
comFC/cflB	Streptococcus pneumoniae TIGR4	36.245	100	0.364
comFC/cflB	Streptococcus pneumoniae Rx1	36.245	100	0.364
comFC/cflB	Streptococcus pneumoniae D39	36.245	100	0.364
comFC/cflB	Streptococcus pneumoniae R6	36.245	100	0.364