Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | MHI23_RS15990 | Genome accession | NZ_CP152024 |
| Coordinates | 3095777..3096373 (+) | Length | 198 a.a. |
| NCBI ID | WP_024427684.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL M7-0003 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3090777..3101373
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHI23_RS15965 (MHI23_15965) | opp1B | 3090956..3091885 (-) | 930 | WP_342492090.1 | nickel/cobalt ABC transporter permease | - |
| MHI23_RS15970 (MHI23_15970) | nikA | 3091901..3093541 (-) | 1641 | WP_025094011.1 | nickel ABC transporter substrate-binding protein | - |
| MHI23_RS15975 (MHI23_15975) | - | 3093662..3094831 (-) | 1170 | WP_342492091.1 | macrolide family glycosyltransferase | - |
| MHI23_RS15980 (MHI23_15980) | - | 3095044..3095226 (+) | 183 | WP_012011344.1 | hypothetical protein | - |
| MHI23_RS15990 (MHI23_15990) | clpP | 3095777..3096373 (+) | 597 | WP_024427684.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| MHI23_RS15995 (MHI23_15995) | - | 3096431..3097009 (-) | 579 | WP_041107909.1 | TIGR00730 family Rossman fold protein | - |
| MHI23_RS16000 (MHI23_16000) | - | 3097147..3097488 (+) | 342 | WP_098677524.1 | MazG-like family protein | - |
| MHI23_RS16005 (MHI23_16005) | - | 3097516..3099138 (-) | 1623 | WP_208946347.1 | SulP family inorganic anion transporter | - |
| MHI23_RS16010 (MHI23_16010) | - | 3099176..3099757 (-) | 582 | WP_342492092.1 | carbonic anhydrase | - |
| MHI23_RS16015 (MHI23_16015) | - | 3100310..3101287 (+) | 978 | WP_075621725.1 | D-glycerate dehydrogenase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21832.00 Da Isoelectric Point: 4.6835
>NTDB_id=985470 MHI23_RS15990 WP_024427684.1 3095777..3096373(+) (clpP) [Bacillus sp. FSL M7-0003]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNTEDQK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNTEDQK
Nucleotide
Download Length: 597 bp
>NTDB_id=985470 MHI23_RS15990 WP_024427684.1 3095777..3096373(+) (clpP) [Bacillus sp. FSL M7-0003]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTGTCACAGCTGCTTTTCTTAGAAGCTG
AAGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGCGGTTCAATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTACTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCTCTTCCAAACAGTGAAGTCATGATTCACCAACCACTAGGCGGTGCCCAAGGTCAAGCAA
CTGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATACAGAAGACCAAAAATAA
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTGTCACAGCTGCTTTTCTTAGAAGCTG
AAGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGCGGTTCAATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTACTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCTCTTCCAAACAGTGAAGTCATGATTCACCAACCACTAGGCGGTGCCCAAGGTCAAGCAA
CTGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATACAGAAGACCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
93.939 |
100 |
0.939 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.539 |
96.465 |
0.652 |
| clpP | Streptococcus thermophilus LMG 18311 |
58.549 |
97.475 |
0.571 |
| clpP | Streptococcus thermophilus LMD-9 |
58.549 |
97.475 |
0.571 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
56.186 |
97.98 |
0.551 |
| clpP | Streptococcus pneumoniae Rx1 |
55.67 |
97.98 |
0.545 |
| clpP | Streptococcus pneumoniae D39 |
55.67 |
97.98 |
0.545 |
| clpP | Streptococcus pneumoniae R6 |
55.67 |
97.98 |
0.545 |
| clpP | Streptococcus pneumoniae TIGR4 |
55.67 |
97.98 |
0.545 |
| clpP | Streptococcus pyogenes JRS4 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus pyogenes MGAS315 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus mutans UA159 |
54.639 |
97.98 |
0.535 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
54.124 |
97.98 |
0.53 |