Detailed information NTG0984990

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MKX52_RS15990
• Genome accession: NZ_CP152014
• Coordinates: 3106605..3107291 (-)
• Length: 228 a.a.
• NCBI ID: WP_342491017.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL R5-0422
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3101605..3112291

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKX52_RS15955 (MKX52_15955)	fliW	3101738..3102172 (-)	435	WP_012011424.1	flagellar assembly protein FliW	-
MKX52_RS15960 (MKX52_15960)	-	3102201..3102779 (-)	579	WP_012011425.1	DUF6470 family protein	-
MKX52_RS15965 (MKX52_15965)	flgL	3102828..3103739 (-)	912	WP_012011426.1	flagellar hook-associated protein FlgL	-
MKX52_RS15970 (MKX52_15970)	flgK	3103749..3105269 (-)	1521	WP_012011427.1	flagellar hook-associated protein FlgK	-
MKX52_RS15975 (MKX52_15975)	-	3105285..3105767 (-)	483	WP_012011428.1	flagellar protein FlgN	-
MKX52_RS15980 (MKX52_15980)	flgM	3105786..3106049 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
MKX52_RS15985 (MKX52_15985)	-	3106129..3106548 (-)	420	WP_012011429.1	TIGR03826 family flagellar region protein	-
MKX52_RS15990 (MKX52_15990)	comFC	3106605..3107291 (-)	687	WP_342491017.1	ComF family protein	Machinery gene
MKX52_RS15995 (MKX52_15995)	-	3107288..3107581 (-)	294	WP_088004423.1	late competence development ComFB family protein	-
MKX52_RS16000 (MKX52_16000)	comFA	3107648..3109027 (-)	1380	WP_140404325.1	DEAD/DEAH box helicase	Machinery gene
MKX52_RS16005 (MKX52_16005)	-	3109147..3109989 (-)	843	WP_088004424.1	DegV family protein	-
MKX52_RS16010 (MKX52_16010)	degU	3110207..3110896 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MKX52_RS16015 (MKX52_16015)	degS	3110961..3112136 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26090.50 Da
• Isoelectric Point: 10.0304

>NTDB_id=984990 MKX52_RS15990 WP_342491017.1 3106605..3107291(-) (comFC) [Bacillus sp. FSL R5-0422]
MICLICEGHFVNPFTWKSLLLLNDDRLCIACKHHLEKIKRPICPACGRAQSNDQLCQDCSRWKERPDSTTVLVKNRSVYA
YNDLMKDVLSRFKFRGDTALAELFKQDAQAVFKRSFSMKEPVLIPIPLSKERQKERGFNQSVILASLIGQPTLQPLMKIH
QSKQSKKKKNERLDQKGMFQIKQTDAIIQRDIILIDDIYTTGATIYDAARILKEAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=984990 MKX52_RS15990 WP_342491017.1 3106605..3107291(-) (comFC) [Bacillus sp. FSL R5-0422]
TTGATCTGCCTGATTTGTGAGGGACATTTTGTCAATCCTTTTACATGGAAATCATTACTTCTATTAAATGATGATCGTCT
ATGTATAGCATGTAAGCATCACTTAGAAAAAATTAAACGTCCGATTTGTCCAGCTTGTGGGAGAGCGCAGTCGAATGATC
AATTATGTCAAGACTGTTCCAGGTGGAAAGAACGCCCTGATTCTACTACAGTACTTGTGAAAAATAGGTCTGTCTATGCT
TACAACGATTTGATGAAAGATGTCCTTTCCCGCTTTAAATTCCGAGGTGATACAGCTTTAGCTGAGCTTTTTAAACAAGA
TGCCCAAGCAGTATTTAAGCGCTCCTTTTCAATGAAAGAACCTGTGCTCATCCCAATTCCTTTAAGTAAAGAAAGACAAA
AGGAAAGAGGGTTTAATCAGTCCGTCATACTTGCTTCCTTGATTGGTCAGCCGACCCTTCAGCCGCTTATGAAAATACAC
CAAAGCAAACAGTCCAAGAAAAAGAAAAATGAACGTTTAGATCAAAAAGGAATGTTTCAAATCAAGCAGACAGATGCGAT
CATTCAAAGGGATATTATCTTGATTGACGACATTTATACAACGGGGGCTACTATTTATGATGCTGCGAGAATTTTAAAAG
AAGCGGGTGCCAAAAGTGTTTCCTCTTTTACGTTAATCCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

• Phosphoribosyl transferase domain (Pribosyltran) (163-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50.87	100	0.513
comFC/cflB	Streptococcus pneumoniae TIGR4	40.175	100	0.404
comFC/cflB	Streptococcus pneumoniae Rx1	40.175	100	0.404
comFC/cflB	Streptococcus pneumoniae D39	40.175	100	0.404
comFC/cflB	Streptococcus pneumoniae R6	40.175	100	0.404
comFC/cflB	Streptococcus mitis NCTC 12261	39.301	100	0.395
comFC/cflB	Streptococcus mitis SK321	39.301	100	0.395