Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | NST65_RS16000 | Genome accession | NZ_CP151983 |
| Coordinates | 3091814..3092410 (+) | Length | 198 a.a. |
| NCBI ID | WP_024427684.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL P4-0248 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3086814..3097410
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST65_RS15980 (NST65_15980) | opp1B | 3086992..3087921 (-) | 930 | WP_034281013.1 | nickel/cobalt ABC transporter permease | - |
| NST65_RS15985 (NST65_15985) | nikA | 3087937..3089577 (-) | 1641 | WP_111926776.1 | nickel ABC transporter substrate-binding protein | - |
| NST65_RS15990 (NST65_15990) | - | 3089699..3090868 (-) | 1170 | WP_111926778.1 | macrolide family glycosyltransferase | - |
| NST65_RS16000 (NST65_16000) | clpP | 3091814..3092410 (+) | 597 | WP_024427684.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| NST65_RS16005 (NST65_16005) | - | 3092468..3093046 (-) | 579 | WP_041107909.1 | TIGR00730 family Rossman fold protein | - |
| NST65_RS16010 (NST65_16010) | - | 3093184..3093525 (+) | 342 | WP_111926782.1 | MazG-like family protein | - |
| NST65_RS16015 (NST65_16015) | - | 3093552..3095174 (-) | 1623 | WP_034281022.1 | SulP family inorganic anion transporter | - |
| NST65_RS16020 (NST65_16020) | - | 3095212..3095793 (-) | 582 | WP_065215043.1 | carbonic anhydrase | - |
| NST65_RS16025 (NST65_16025) | - | 3096347..3097324 (+) | 978 | WP_065214804.1 | D-glycerate dehydrogenase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21832.00 Da Isoelectric Point: 4.6835
>NTDB_id=983391 NST65_RS16000 WP_024427684.1 3091814..3092410(+) (clpP) [Bacillus sp. FSL P4-0248]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNTEDQK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNTEDQK
Nucleotide
Download Length: 597 bp
>NTDB_id=983391 NST65_RS16000 WP_024427684.1 3091814..3092410(+) (clpP) [Bacillus sp. FSL P4-0248]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTGTCACAGCTGCTTTTCTTAGAAGCTG
AAGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGCGGTTCAATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCTCTTCCAAACAGTGAAGTCATGATTCACCAACCACTCGGCGGTGCCCAAGGTCAAGCAA
CTGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATACAGAAGACCAAAAATAA
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTGTCACAGCTGCTTTTCTTAGAAGCTG
AAGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGCGGTTCAATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCTCTTCCAAACAGTGAAGTCATGATTCACCAACCACTCGGCGGTGCCCAAGGTCAAGCAA
CTGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATACAGAAGACCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
93.939 |
100 |
0.939 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.539 |
96.465 |
0.652 |
| clpP | Streptococcus thermophilus LMG 18311 |
58.549 |
97.475 |
0.571 |
| clpP | Streptococcus thermophilus LMD-9 |
58.549 |
97.475 |
0.571 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
56.186 |
97.98 |
0.551 |
| clpP | Streptococcus pneumoniae Rx1 |
55.67 |
97.98 |
0.545 |
| clpP | Streptococcus pneumoniae D39 |
55.67 |
97.98 |
0.545 |
| clpP | Streptococcus pneumoniae R6 |
55.67 |
97.98 |
0.545 |
| clpP | Streptococcus pneumoniae TIGR4 |
55.67 |
97.98 |
0.545 |
| clpP | Streptococcus pyogenes JRS4 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus pyogenes MGAS315 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus mutans UA159 |
54.639 |
97.98 |
0.535 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
54.124 |
97.98 |
0.53 |