Detailed information NTG0983051

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: NST24_RS16830
• Genome accession: NZ_CP151977
• Coordinates: 3247206..3247892 (-)
• Length: 228 a.a.
• NCBI ID: WP_172793290.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL R5-0286
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3242206..3252892

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NST24_RS16795 (NST24_16795)	fliW	3242343..3242777 (-)	435	WP_025208061.1	flagellar assembly protein FliW	-
NST24_RS16800 (NST24_16800)	-	3242806..3243384 (-)	579	WP_342462018.1	DUF6470 family protein	-
NST24_RS16805 (NST24_16805)	flgL	3243430..3244341 (-)	912	WP_008348257.1	flagellar hook-associated protein FlgL	-
NST24_RS16810 (NST24_16810)	flgK	3244350..3245870 (-)	1521	WP_058336981.1	flagellar hook-associated protein FlgK	-
NST24_RS16815 (NST24_16815)	-	3245886..3246368 (-)	483	WP_007499977.1	flagellar protein FlgN	-
NST24_RS16820 (NST24_16820)	flgM	3246387..3246650 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
NST24_RS16825 (NST24_16825)	-	3246730..3247149 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
NST24_RS16830 (NST24_16830)	comFC	3247206..3247892 (-)	687	WP_172793290.1	ComF family protein	Machinery gene
NST24_RS16835 (NST24_16835)	-	3247889..3248182 (-)	294	WP_008348267.1	competence protein ComFB	-
NST24_RS16840 (NST24_16840)	comFA	3248247..3249374 (-)	1128	WP_342462019.1	DEAD/DEAH box helicase	Machinery gene
NST24_RS16845 (NST24_16845)	-	3249746..3250588 (-)	843	WP_024719242.1	DegV family protein	-
NST24_RS16850 (NST24_16850)	degU	3250800..3251489 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NST24_RS16855 (NST24_16855)	degS	3251554..3252729 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26116.62 Da
• Isoelectric Point: 10.1473

>NTDB_id=983051 NST24_RS16830 WP_172793290.1 3247206..3247892(-) (comFC) [Bacillus sp. FSL R5-0286]
MICPICESHFVAAFTWKSFLLLNEDRLCVACKNHLMKIQGPTCPKCGRAQSNDQLCQDCSRWDKRRDFAEILVMNRSVYA
YNDFMKDILARFKFRGDTALADLFKKDVQSAFKRSFSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVH
QSKQSKKRKNERLHQQNLFQLRQSNPIVLKDIILIDDIYTTGATVYHAAKILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=983051 NST24_RS16830 WP_172793290.1 3247206..3247892(-) (comFC) [Bacillus sp. FSL R5-0286]
TTGATTTGTCCAATTTGTGAGAGCCATTTTGTGGCTGCTTTTACATGGAAATCATTCCTACTATTAAATGAAGATCGTTT
ATGTGTAGCATGTAAGAACCACCTGATGAAGATTCAAGGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATCAAATGATC
AATTGTGTCAGGATTGTTCAAGGTGGGATAAACGACGGGATTTTGCTGAGATTCTTGTAATGAATCGGTCTGTTTATGCT
TACAACGACTTTATGAAAGATATTCTAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGA
TGTACAGTCAGCGTTTAAACGTTCTTTTTCAATCAAAGAACCGGTCCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAA
AGGAAAGAGGATTCAATCAGTCAATGATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACAT
CAAAGTAAGCAGTCTAAGAAAAGAAAAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGTCAAACCCGAT
CGTTCTAAAGGATATCATATTAATCGATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAG
ACGCAGGCGCCAAAAGTGTTTCCTCTTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

• Phosphoribosyl transferase domain (Pribosyltran) (161-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.565	100	0.5
comFC/cflB	Streptococcus mitis SK321	38.428	100	0.386
comFC/cflB	Streptococcus mitis NCTC 12261	37.991	100	0.382
comFC/cflB	Streptococcus pneumoniae R6	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae TIGR4	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae Rx1	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae D39	37.118	100	0.373