Detailed information NTG0981324

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: AAFX34_RS11195
• Genome accession: NZ_CP151937
• Coordinates: 777640..781029 (-)
• Length: 1129 a.a.
• NCBI ID: WP_411132500.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain TBV029
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 772640..786029

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAFX34_RS11180 (AAFX34_11170)	-	772872..773897 (-)	1026	WP_011079591.1	ABC transporter permease	-
AAFX34_RS11185 (AAFX34_11175)	-	773900..774886 (-)	987	WP_011079592.1	ABC transporter permease	-
AAFX34_RS11190 (AAFX34_11180)	-	775055..776728 (-)	1674	WP_011079593.1	ABC transporter substrate-binding protein	-
AAFX34_RS11195 (AAFX34_11185)	chiS	777640..781029 (-)	3390	WP_411132500.1	response regulator	Regulator
AAFX34_RS11200 (AAFX34_11190)	rsmC	781276..782298 (-)	1023	WP_072615517.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
AAFX34_RS11205 (AAFX34_11195)	-	782372..783457 (-)	1086	WP_013571166.1	AI-2E family transporter	-
AAFX34_RS11210 (AAFX34_11200)	hemL	783707..785002 (-)	1296	WP_011079597.1	glutamate-1-semialdehyde 2,1-aminomutase	-
AAFX34_RS11215 (AAFX34_11205)	erpA	785290..785631 (+)	342	WP_011079598.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127548.48 Da
• Isoelectric Point: 5.8196

>NTDB_id=981324 AAFX34_RS11195 WP_411132500.1 777640..781029(-) (chiS) [Vibrio vulnificus strain TBV029]
MFKFYRKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQILDYFQAQETEVMGFVRS
ELAYASGGRFYGLVNAFKSLGVDMEQARENAQQRYIQGSGDQIKTSILPESSSFVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDLDGNVTYSIYKNENFGTNLIEGPFKESMLGKSFRQLANDVSEKRKQNEDYTPVYISDFSVEDGKQVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLIADINKDAAIHTLLVGSDHLPRTMTTKQTDIESSIEVVDKALAGLTDVGTYINSSDEA
TIAAYAPISFKGQTWALVVQLPEKEAFARIHQLEKLFVIAMLIAIVLVFISSHYLSNFITSPLLKLTWAAERVSAGDLDE
NMINTERKDEIGRLAISFERMQRSIRDKIQLIKTQNAELEKNLQLIQKQNDELQLADKLKDEFLATTSHELRTPLHGMIG
IAENLISGANGPLPSNQRYQLDIIIKSGQRLATLVDDLLDYHKMRYGSLDIQKSAVNLASATRLVLELSHHLLGNKTLRI
INQVSNDVAPVSADPQRLEQVLYNLIGNAIKYTTEGKIVISANVVDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGRDSG
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASADEISATEVMQNQHHFQAPDSNELISLDNSSLPENP
NGPLLIVADDEPVNLRVLESFLRIEGYRVQTASDGPDTLELIEHEKPALLLLDIMMPGMSGYQVCHQLRQQYDMAELPII
MLTALSQSEDRVRGFEAGANDYLTKPFNKQELAARIKAHLMASKAEARRLENNRLEAELRQRAMVEASLLETQGRLLEQL
ESAPEAIICIREDKRIRFANDAACKLFKRSLEQLKRSNAEELIAPKYLTVKQQHYCGNIDIYVDDVRQHIETDILKLPEG
SGLDAMFIFNVGGGAAASRVHNLETAVEVLSSYAFDGDKERLQSLKELGGEFTRLADKALGTNKNKQELMREVLVDLMTH
ALDYWESVTGENKFTFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEYILEHCKEQSPERTYIEMQR
DKLQRLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=981324 AAFX34_RS11195 WP_411132500.1 777640..781029(-) (chiS) [Vibrio vulnificus strain TBV029]
ATGTTTAAGTTTTATCGCAAACAGAAGTTTAAACGCCTTCAAAGTACTCTGATGACTGCGTTTTTGGTGCTGAGTATCAC
GCCATTAACCATCACAGCGATTTTCTTTTTGCAATCACACAGTAAAGATCTCCAAGAACAGAGCACTTCTCACCTGCTTT
CTGTTCGAGACACCAAACAACAACAGATCCTGGATTATTTCCAAGCACAAGAAACGGAAGTGATGGGATTTGTCCGTTCA
GAGTTGGCTTACGCGAGTGGTGGCCGATTTTACGGGCTTGTCAACGCCTTCAAAAGCTTAGGCGTGGATATGGAACAGGC
TCGAGAAAACGCTCAACAGCGCTATATTCAGGGGTCTGGCGATCAAATAAAAACGTCGATTTTACCGGAATCCAGCTCTT
TTGTTGGTAGTGAACGCTACCGTTTACTACATAAGCGCTATCACTGGGCCTATTTGGAGCTTTTGAAGCGCTCCGATTTT
GACGATATTTTGTTGGTGGATCTCGATGGCAACGTCACCTACTCCATCTACAAAAATGAAAACTTTGGCACAAACTTAAT
TGAAGGGCCTTTTAAAGAGAGCATGCTCGGCAAAAGCTTCCGTCAATTGGCCAATGACGTCAGCGAAAAACGCAAGCAAA
ACGAAGACTATACCCCCGTCTATATTTCCGACTTCTCGGTTGAAGATGGCAAACAAGTCGCTTGGTTGGGTGCACCGATC
ATCCAGCAAGGCTATCTGCACAGCTACGCCATGTTCAGGCTACCCAACAATGGCATCACTAAACTGATTGCAGACATCAA
TAAAGATGCAGCTATCCACACTTTGCTGGTTGGAAGTGACCACTTACCTCGCACGATGACCACAAAGCAAACCGATATCG
AAAGCAGTATTGAAGTGGTCGATAAGGCCCTCGCGGGACTGACGGATGTGGGGACTTATATCAACAGCAGCGATGAGGCG
ACCATCGCCGCCTATGCGCCAATTTCATTCAAAGGTCAAACCTGGGCGTTAGTGGTTCAGTTGCCGGAGAAAGAAGCGTT
TGCACGCATTCATCAGTTAGAAAAACTGTTCGTCATCGCTATGTTGATTGCGATCGTGCTGGTGTTTATCTCATCTCACT
ACTTATCGAATTTCATCACCTCACCACTACTCAAACTCACTTGGGCTGCAGAGCGCGTTTCTGCAGGTGATCTCGATGAA
AACATGATTAATACCGAGCGCAAAGACGAAATTGGCCGTTTAGCGATCAGTTTTGAACGAATGCAACGCTCTATTCGCGA
TAAAATTCAGCTCATTAAAACGCAAAATGCGGAGCTAGAGAAAAATCTACAACTGATTCAAAAGCAAAATGACGAATTGC
AATTGGCCGATAAGCTCAAAGATGAATTTTTGGCGACGACCTCTCATGAGCTACGCACTCCACTGCATGGCATGATTGGT
ATTGCAGAAAACCTCATCTCAGGGGCAAACGGCCCACTGCCCTCTAACCAGCGCTATCAACTGGACATTATTATTAAGAG
TGGCCAGCGCTTAGCTACGCTTGTGGATGACTTGCTTGACTACCACAAAATGCGCTATGGCAGTTTGGATATTCAAAAGT
CCGCCGTCAATTTGGCCAGTGCAACTCGACTGGTATTAGAGCTCTCTCACCATTTATTGGGCAACAAAACTCTGCGCATC
ATTAATCAGGTTTCTAACGATGTTGCGCCGGTATCTGCCGATCCACAGCGATTAGAACAGGTGCTGTATAACCTTATTGG
CAACGCGATCAAATACACCACTGAAGGGAAAATCGTCATTTCCGCCAATGTGGTTGACGATAAAGTTCGAGTGCAAGTCG
TCGATACCGGCCAAGGCATTCCCGCAGAACAGTTGGAGCATATTTTCGAACCGCTTATTCAAGCTGGTCGCGACTCTGGT
CGTTATCGCCAAGGTGCCGGTCTGGGACTTTCCATTAGCCGTCAGCTTATCGAGTTAATGGGAGGATCGCTCTACGTCAG
CAGTCAACCTATGGTTGGCACCACCTTTAGCTTCACCTTGCCATTGGCCAGCGCAGACGAAATCAGTGCCACGGAAGTCA
TGCAAAATCAACATCACTTCCAAGCGCCAGATAGCAATGAATTGATCTCATTAGATAATTCATCACTGCCAGAAAATCCC
AATGGTCCGCTACTGATTGTGGCCGATGATGAACCCGTCAACTTACGCGTGCTTGAAAGTTTCCTACGCATCGAAGGGTA
CCGAGTGCAAACGGCCTCAGATGGCCCAGACACTCTCGAACTCATTGAACATGAAAAACCCGCCTTGCTGCTGCTCGACA
TAATGATGCCAGGCATGAGCGGTTATCAAGTTTGCCATCAACTCCGACAGCAATACGACATGGCAGAATTGCCTATTATC
ATGCTAACGGCGTTGAGTCAGAGCGAAGATCGCGTGCGAGGATTCGAAGCTGGGGCCAATGATTACTTAACCAAACCATT
TAATAAGCAAGAGCTTGCGGCCCGAATTAAAGCGCATTTAATGGCAAGTAAAGCAGAAGCTCGTCGCTTGGAAAATAATC
GCCTTGAAGCGGAGCTTCGCCAACGTGCTATGGTAGAAGCGAGCTTACTGGAAACACAAGGGCGTTTATTAGAACAATTG
GAATCGGCCCCAGAAGCCATTATCTGTATTCGTGAAGATAAGCGTATTCGCTTTGCCAATGACGCGGCCTGTAAACTGTT
CAAACGCAGCTTAGAGCAACTCAAGCGCTCAAACGCAGAAGAACTTATTGCACCCAAATATTTAACCGTCAAACAGCAGC
ACTATTGCGGCAATATCGATATCTATGTCGACGATGTTCGACAGCATATTGAAACGGATATCCTTAAACTACCAGAAGGG
TCTGGCCTTGATGCGATGTTTATCTTTAATGTCGGGGGAGGCGCTGCTGCTTCTCGTGTGCACAACCTAGAAACCGCCGT
AGAAGTCCTTTCAAGCTATGCCTTTGATGGTGACAAAGAGCGCTTACAGAGCCTCAAAGAGCTAGGGGGAGAATTTACTC
GCCTGGCCGACAAAGCGCTGGGTACCAATAAGAATAAGCAAGAGCTGATGCGTGAAGTCCTCGTGGATTTGATGACGCAT
GCACTCGATTATTGGGAGTCAGTGACAGGTGAAAACAAATTTACCTTTGCTGAACAAAGTGGTTTATGGCGTGTTTATCT
CGACCGCAGCACGCTACAAACTCGCACACTTGATAAATACATGCGAATTGAAACCTTGCCAAAAACGCCGCGTTGGAGAA
CCGTGTTGAGTTCTATTGAGTACATTCTGGAGCACTGTAAAGAGCAAAGTCCTGAGCGTACTTACATTGAGATGCAGCGA
GATAAATTACAACGCCTGCTCACCAGCTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-837)

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• PAS fold (PAS) (877-926)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	77.148	100	0.771