Detailed information NTG0981323

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: ACLM40_RS03975
• Genome accession: NZ_CP182859
• Coordinates: 876842..879670 (-)
• Length: 942 a.a.
• NCBI ID: WP_005607713.1
• Uniprot ID: -
• Organism: Actinobacillus pleuropneumoniae strain APPFJLYC01
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 871842..884670

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLM40_RS03955 (ACLM40_03955)	-	873325..874011 (-)	687	WP_009874890.1	CidB/LrgB family autolysis modulator	-
ACLM40_RS03960 (ACLM40_03960)	-	874021..874380 (-)	360	WP_005601040.1	CidA/LrgA family protein	-
ACLM40_RS03965 (ACLM40_03965)	-	874447..876369 (-)	1923	WP_005607710.1	ATP-dependent DNA helicase	-
ACLM40_RS03970 (ACLM40_03970)	-	876491..876703 (+)	213	WP_005597221.1	hypothetical protein	-
ACLM40_RS03975 (ACLM40_03975)	uvrA	876842..879670 (-)	2829	WP_005607713.1	excinuclease ABC subunit UvrA	Machinery gene
ACLM40_RS03980 (ACLM40_03980)	ssb	879821..880345 (+)	525	WP_039195080.1	single-stranded DNA-binding protein	Machinery gene
ACLM40_RS03985 (ACLM40_03985)	-	880514..881332 (-)	819	WP_418146675.1	GIY-YIG nuclease family protein	-
ACLM40_RS03990 (ACLM40_03990)	-	881590..882318 (-)	729	WP_005597226.1	hypothetical protein	-
ACLM40_RS03995 (ACLM40_03995)	-	882329..883630 (-)	1302	WP_418146677.1	ATP-binding protein	-

Sequence

Protein

• Length: 942 a.a.
• Molecular weight: 104439.92 Da
• Isoelectric Point: 6.5127

>NTDB_id=981323 ACLM40_RS03975 WP_005607713.1 876842..879670(-) (uvrA) [Actinobacillus pleuropneumoniae strain APPFJLYC01]
MQYIDVRGARTHNLKNINLILPRDKFIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARVGEPRCPEHDLPLAAQTISQMVDRVMEEPEGKRLMLLAPVVKDRKG
EHVKLLENLTASGYIRARIDGEICDLSDPPALELQKKHTIEVVVDRFKVRSDIATRLAESFETALDLSGSTAIIADMDDP
NADEIVFSSSFACPHCGYSLHELEPRLFSFNNPAGACPMCDGLGVEQYFDPNKVVQNPDVSLASGAIKGWDRRSFYYFGL
LKSVADHYDFSLDTPFKDLTKKQREIILNGSKDEIEFVYVNDRGDKVKRKHTFEGVLNNMARRYKETESNSVREELAKYI
NSRPCLECEGSRLRREARYVFLDKTNLPMVSEKSIGEALEFFEQLDLAGQKAKIAEKILKEIRERLQFLVNVGLNYLSLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDAIRAADHIVDIG
PGAGVHGGQVIAQGTAEEIMQVEDSITGQFLSGKQKIEIPAKRVSYDAAKLLTLKGASGNNLKQVQLDIPVGLFTCITGV
SGSGKSTLINDTLFPLAQNALNRAERTDVAPYESIDGLSHFDKVIDIDQSPIGRTPRSNPATYTGLFTPIRELFAGTQEA
RARGYNVGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEIRYKGKTIHQVLDMTVEEAREFFA
PVPAIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKLATELSKRDTGKTLYILDEPTTGLHFADIKQLLSVLHKLRDQ
GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGQIIATGTPEEVAKDKRSHTARFLKEILAKG

Nucleotide

• Length: 2829 bp

>NTDB_id=981323 ACLM40_RS03975 WP_005607713.1 876842..879670(-) (uvrA) [Actinobacillus pleuropneumoniae strain APPFJLYC01]
ATGCAGTACATTGATGTTCGTGGTGCGCGAACCCACAACCTTAAAAATATCAATTTAATTCTTCCTCGAGATAAATTTAT
TGTAATTACCGGCTTATCCGGATCGGGTAAGTCTTCTTTAGCTTTCGATACGCTGTATGCGGAAGGGCAACGCCGTTATG
TGGAATCCCTTTCAGCCTATGCACGCCAATTCCTTTCATTGATGGAAAAACCGGATGTTGACCATATTGAAGGACTTTCA
CCGGCAATTTCTATCGAGCAAAAATCCACCTCGCATAACCCTCGTTCTACGGTCGGGACGGTAACCGAAATTCACGACTA
TTTACGTCTATTATTTGCCCGAGTGGGTGAGCCTCGCTGTCCGGAGCACGATTTACCGTTGGCGGCACAAACCATTTCGC
AAATGGTGGATAGAGTAATGGAAGAGCCGGAAGGCAAACGTTTGATGTTACTTGCACCGGTGGTCAAAGATCGTAAAGGC
GAACACGTAAAATTATTGGAAAATTTGACCGCTTCCGGCTATATCCGAGCCAGAATTGACGGCGAAATCTGTGATTTATC
TGATCCGCCGGCATTGGAATTACAGAAAAAGCACACAATTGAAGTGGTGGTCGATCGCTTTAAAGTGAGAAGTGATATTG
CAACTCGCCTAGCGGAATCTTTTGAAACGGCATTGGATTTATCCGGTTCGACAGCGATTATTGCCGATATGGACGATCCG
AATGCGGATGAAATTGTCTTTTCATCCAGTTTTGCTTGCCCGCATTGCGGCTATTCGTTGCACGAATTAGAACCTCGTTT
GTTCTCATTTAATAACCCGGCCGGTGCTTGTCCGATGTGTGACGGCTTAGGGGTAGAGCAGTATTTTGACCCGAACAAAG
TGGTACAAAATCCGGATGTCTCGTTAGCAAGCGGCGCAATTAAAGGTTGGGATCGCCGTAGCTTTTACTATTTTGGTTTG
TTGAAATCGGTGGCGGATCATTACGATTTTTCACTGGATACGCCGTTTAAAGATCTGACTAAAAAACAACGTGAAATTAT
TCTGAACGGTTCAAAAGACGAAATCGAATTTGTTTATGTTAATGATCGCGGTGATAAAGTAAAACGCAAACATACCTTTG
AAGGTGTGCTAAATAATATGGCTCGCCGTTATAAAGAAACCGAGTCGAATTCGGTGCGTGAAGAATTAGCGAAATATATC
AATAGCCGCCCGTGTTTAGAGTGTGAAGGATCTCGCTTACGTCGTGAGGCACGTTATGTCTTTTTAGATAAAACCAATTT
GCCGATGGTGTCGGAAAAATCGATTGGCGAAGCGTTAGAATTTTTTGAACAGTTAGATCTTGCCGGTCAAAAAGCGAAGA
TTGCGGAGAAAATTTTAAAAGAAATTCGTGAACGTTTGCAGTTCTTGGTCAATGTCGGCTTGAATTACCTCTCGCTTTCT
CGTTCGGCGGAAACCTTATCCGGCGGTGAGGCGCAACGTATCCGTTTAGCCAGCCAAATCGGTGCAGGCTTGGTTGGGGT
GATGTATGTGCTGGATGAGCCGTCTATCGGATTGCACCAACGTGATAACGAACGTTTATTAAATACCTTAATTCATCTGC
GTAATTTGGGTAATACCGTAATTGTGGTGGAGCATGATGAAGATGCGATCCGTGCCGCAGATCATATTGTCGATATCGGC
CCGGGAGCCGGTGTGCACGGTGGCCAAGTTATTGCACAAGGTACAGCGGAAGAAATTATGCAGGTGGAAGATTCGATTAC
CGGACAATTCCTCTCCGGCAAGCAGAAGATTGAAATTCCGGCAAAACGAGTGTCTTATGACGCGGCTAAATTGCTAACCT
TAAAAGGGGCAAGCGGTAATAACTTAAAACAAGTACAGTTGGATATTCCGGTTGGTTTATTCACTTGTATTACCGGTGTC
TCGGGTTCGGGTAAATCGACTCTAATCAACGATACCTTGTTCCCATTAGCACAAAATGCGTTAAATCGTGCGGAACGTAC
CGATGTCGCACCTTATGAGTCAATTGACGGCTTATCGCATTTCGATAAAGTGATTGATATCGACCAAAGCCCGATTGGGC
GTACACCACGTTCAAACCCGGCAACCTATACCGGTTTATTTACGCCGATTCGTGAATTATTTGCCGGTACACAAGAAGCG
AGAGCGAGAGGCTATAATGTCGGACGCTTTAGTTTTAATGTGCGTGGCGGACGTTGTGAAGCCTGTCAAGGCGATGGCGT
GATTAAAGTGGAAATGCACTTCCTACCGGATGTATATGTGCCGTGTGATCATTGCAAAGGTAAACGTTATAACCGAGAAA
CTTTGGAAATCCGTTATAAAGGCAAAACGATTCATCAAGTGTTGGATATGACGGTGGAAGAAGCGAGAGAATTTTTCGCA
CCGGTACCGGCGATTGCGCGTAAATTGCAAACCTTAATGGATGTCGGTTTATCGTATATTCGCTTAGGACAGTCCTCGAC
CACGCTTTCCGGCGGTGAAGCGCAGCGTGTTAAATTAGCGACCGAGCTTTCCAAACGTGATACCGGCAAAACGCTGTATA
TCTTAGACGAACCGACCACCGGTTTACATTTTGCCGATATTAAACAGCTACTTTCGGTGTTACACAAATTGCGTGACCAA
GGTAATACGATTGTGGTGATCGAGCATAATTTAGATGTGATTAAAACCGCCGACTGGATTGTGGACTTAGGCCCTGAAGG
CGGTTCGGGTGGCGGACAAATTATTGCGACCGGCACACCGGAAGAGGTAGCGAAAGACAAACGCTCGCACACGGCAAGAT
TTTTAAAAGAGATCTTAGCTAAAGGGTAA

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (290-398)

• UvrA interaction domain (UvrA_inter) (130-237)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	56.823	99.575	0.566
uvrA	Streptococcus pneumoniae TIGR4	56.823	99.575	0.566
uvrA	Streptococcus pneumoniae D39	56.823	99.575	0.566