Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   ABXG87_RS05305 Genome accession   NZ_AP031488
Coordinates   1166840..1167322 (-) Length   160 a.a.
NCBI ID   WP_002885066.1    Uniprot ID   -
Organism   Streptococcus salivarius strain NBRC 13956     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1161840..1172322
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXG87_RS05290 (Ssa13956_09880) lepB 1163754..1164311 (-) 558 WP_347095955.1 signal peptidase I -
  ABXG87_RS05295 (Ssa13956_09890) - 1164433..1165662 (-) 1230 WP_353551167.1 tetratricopeptide repeat protein -
  ABXG87_RS05300 (Ssa13956_09900) - 1165652..1166830 (-) 1179 WP_002890855.1 AI-2E family transporter -
  ABXG87_RS05305 (Ssa13956_09910) mutX 1166840..1167322 (-) 483 WP_002885066.1 8-oxo-dGTP diphosphatase Machinery gene
  ABXG87_RS05310 (Ssa13956_09920) ftsX 1167477..1168406 (-) 930 WP_003092823.1 permease-like cell division protein FtsX -
  ABXG87_RS05315 (Ssa13956_09930) ftsE 1168399..1169091 (-) 693 WP_013990672.1 cell division ATP-binding protein FtsE -
  ABXG87_RS05325 (Ssa13956_09950) queG 1170329..1171447 (-) 1119 WP_013990673.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18793.15 Da        Isoelectric Point: 4.4433

>NTDB_id=98094 ABXG87_RS05305 WP_002885066.1 1166840..1167322(-) (mutX) [Streptococcus salivarius strain NBRC 13956]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREILEETHFTVTEMDFKGMITFPEFTPGH
DWYTYVFKVTGFEGELISDEESREGTLEWVPYDEVLSKPTWEGDYEIFKWILEDKPFFSAKFVYDRNQNLVDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=98094 ABXG87_RS05305 WP_002885066.1 1166840..1167322(-) (mutX) [Streptococcus salivarius strain NBRC 13956]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGAAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTTGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTCTCGAGGAAACCCATTTTACAGTGACTGAGATGGATTTTAAAGGGATGATTACCTTTCCAGAATTTACCCCTGGTCAT
GATTGGTATACCTATGTCTTTAAGGTAACTGGTTTTGAAGGAGAACTCATCTCAGATGAGGAGTCTCGTGAAGGAACGCT
TGAATGGGTACCTTATGATGAGGTCTTATCTAAACCAACTTGGGAAGGTGACTATGAGATCTTCAAGTGGATTCTTGAAG
ATAAGCCTTTCTTCTCTGCAAAATTTGTCTATGATCGTAACCAAAACTTAGTAGACAAGACTGTAACCTTTTATGATAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

72.956

99.375

0.725

Multiple sequence alignment