Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxS   Type   Regulator
Locus tag   ACM6AQ_RS10460 Genome accession   NZ_CP181136
Coordinates   2106302..2106772 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain AG21-0619     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2101302..2111772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM6AQ_RS10440 (ACM6AQ_10440) coaW 2101612..2102415 (+) 804 WP_000862733.1 type II pantothenate kinase -
  ACM6AQ_RS10445 (ACM6AQ_10445) - 2102545..2103216 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  ACM6AQ_RS10450 (ACM6AQ_10450) ldmS 2103615..2104808 (-) 1194 WP_072491801.1 L-aspartate--L-methionine ligase LdmS -
  ACM6AQ_RS10455 (ACM6AQ_10455) - 2104808..2105992 (-) 1185 WP_044122352.1 M20 family metallopeptidase -
  ACM6AQ_RS10460 (ACM6AQ_10460) luxS 2106302..2106772 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  ACM6AQ_RS10465 (ACM6AQ_10465) - 2106924..2107274 (-) 351 WP_001024035.1 membrane protein -
  ACM6AQ_RS10470 (ACM6AQ_10470) - 2107288..2108589 (-) 1302 WP_001242306.1 pyrimidine-nucleoside phosphorylase -
  ACM6AQ_RS10475 (ACM6AQ_10475) deoC 2108869..2109531 (-) 663 WP_416152820.1 deoxyribose-phosphate aldolase -
  ACM6AQ_RS10480 (ACM6AQ_10480) deoD 2109845..2110555 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  ACM6AQ_RS10485 (ACM6AQ_10485) - 2110676..2111119 (-) 444 WP_000070865.1 Dps family protein -
  ACM6AQ_RS10490 (ACM6AQ_10490) - 2111319..2111732 (-) 414 WP_072491803.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence


Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=978109 ACM6AQ_RS10460 WP_000164421.1 2106302..2106772(+) (luxS) [Staphylococcus aureus strain AG21-0619]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=978109 ACM6AQ_RS10460 WP_000164421.1 2106302..2106772(+) (luxS) [Staphylococcus aureus strain AG21-0619]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATATGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCTG
GATTGCATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTCGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains


Predicted by InterProScan.

(5-148)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P65329

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404


Multiple sequence alignment